DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG11085 and nkx6-2

DIOPT Version :10

Sequence 1:NP_572815.3 Gene:CG11085 / 32213 FlyBaseID:FBgn0030408 Length:295 Species:Drosophila melanogaster
Sequence 2:XP_002937836.1 Gene:nkx6-2 / 100038084 XenbaseID:XB-GENE-484527 Length:281 Species:Xenopus tropicalis


Alignment Length:84 Identity:32/84 - (38%)
Similarity:54/84 - (64%) Gaps:3/84 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly   153 LSKSGRKPRRRRTAFTHAQLAYLERKFRCQKYLSVADRSDVAETLNLSETQVKTWYQNRRTKWKR 217
            |.|.|:|...|.| |:..|:..||:.|...|||:..:|:.:|.:|.::|:|||.|:|||||||::
 Frog   148 LDKDGKKKHSRPT-FSGQQIFALEKTFEQTKYLAGPERARLAYSLGMTESQVKVWFQNRRTKWRK 211

  Fly   218 QN--QLRLEQLRHQATMEK 234
            ::  ::...:.:|.:..||
 Frog   212 RHAAEMATAKKKHDSETEK 230

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG11085NP_572815.3 Homeodomain 161..217 CDD:459649 25/55 (45%)
nkx6-2XP_002937836.1 Homeodomain 153..211 CDD:459649 26/58 (45%)

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