DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment hwt and she

DIOPT Version :10

Sequence 1:NP_001259484.1 Gene:hwt / 32202 FlyBaseID:FBgn0264542 Length:1768 Species:Drosophila melanogaster
Sequence 2:XP_689987.3 Gene:she / 561493 ZFINID:ZDB-GENE-090915-6 Length:438 Species:Danio rerio


Alignment Length:580 Identity:130/580 - (22%)
Similarity:215/580 - (37%) Gaps:171/580 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly  1201 PPSTNSNSNAASASASASVSATGSAAPRRPRS-FVLESGRVLELRRSAQGHQGGQSTHHHHHHHH 1264
            |.|..:.|:..   .|||.|.|.|    ||:. ..:.:|....||:::....||           
Zfish     9 PTSLKTGSDRI---RSASESGTQS----RPKPVLTVGTGSKGSLRKNSGAENGG----------- 55

  Fly  1265 HAPGSRRNRHGQS-QGQTTGGGHNYSSTESIATSSSGGSMESLRSSTSEGN------------RS 1316
            ...|.....||:: :......|.|:|||.|:   ..|...|.|....|:.|            |:
Zfish    56 GGGGVGSLLHGRNRKNSAIELGRNHSSTGSM---KDGKIWEILIPGKSKKNTKMEGFEDHRTLRT 117

  Fly  1317 TSSSESRHSSSLSSHSSESGSGGSGGSGGSSVAYPLRPAPLLLHSKLHILSPISDKSSQEPASAS 1381
            ||.::...|..:..:..:|..|||......:.: |:|..|:::            :...:|..|.
Zfish   118 TSLADEYMSRMIKVNDPKSSPGGSSPDSERAKS-PIRTEPIIV------------EDYADPFDAE 169

  Fly  1382 ASEQSQQPSQQLAPMASQEDDSTTSGAPAGNQVQVNASLKQPRSNRGAPNKALLQLADELLGSDS 1446
            .:.:.::        |.:|.::.....|...|:.:....:     ||  :|.||::.        
Zfish   170 KTREQKE--------AEREGENDGYMEPYDAQLIITEIRR-----RG--SKDLLKVC-------- 211

  Fly  1447 GISLHSREDGKPQALALQRLTLPKLQLIGAEGTTTSATASGAGGSSATGGSSGAGGSGSGSVVAS 1511
                                    :.|.|.||.                      |||...:.  
Zfish   212 ------------------------VVLNGGEGE----------------------GSGPPQIY-- 228

  Fly  1512 GSTGIQQDLRDLPFDMPKLRRRKTLQQEAACTSGSATSVDLGELPFDMPKLRRRLRANQAEINNL 1576
             ....::.|..:|...|:...|...:.               |||::..| .:.:||..|:.:..
Zfish   229 -DVPYEEVLEGIPLTRPESDSRPPAEY---------------ELPWEWKK-EQIVRALSAQFDGA 276

  Fly  1577 LMHSTESSGISQASSSHSMRDDQKMSSKLDTALFRQNLTLNLNESRQATKQFGSLDLRGLNSNKE 1641
            ...|.|.||                           :.|:     :|.|.:..|...:.|..|..
Zfish   277 ERMSKEESG---------------------------SPTI-----KQQTLRHKSWTTKSLRPNPP 309

  Fly  1642 LNMNLSQGYVT---AVDLIDVTIPLERQGWYHGAITRIEAETTLRPLSEGSFLVRNCESTKQDYS 1703
            ...:.|...:|   ...::|.|:|||:|.||||:::|.|||..|:...|.|||||:.||....||
Zfish   310 SPTSPSSPSITPDSETPIVDPTLPLEKQSWYHGSVSRQEAEAQLQQCREASFLVRDSESATSKYS 374

  Fly  1704 LSLKGAKGFMHMRIQRNETGQYILGQFSRPFETVPEMIRHFCLNRLPVRGAEHMCLIEPV 1763
            ::||.::|.:|:.:.:.:...|.|.:.|..|.::||::.|:|..|||..|||||.|..||
Zfish   375 IALKTSQGCVHIIVAQTKECGYTLEKSSCVFPSIPEVVHHYCTQRLPFTGAEHMTLQHPV 434

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
hwtNP_001259484.1 SH2_SHB_SHD_SHE_SHF_like 1666..1763 CDD:198198 41/96 (43%)
sheXP_689987.3 SH2_SHE 337..434 CDD:198254 41/96 (43%)

Return to query results.
Submit another query.