DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG15731 and zmat4b

DIOPT Version :8

Sequence 1:NP_572799.1 Gene:CG15731 / 32194 FlyBaseID:FBgn0030390 Length:319 Species:Drosophila melanogaster
Sequence 2:XP_017213517.2 Gene:zmat4b / 100005974 ZFINID:ZDB-GENE-091118-68 Length:229 Species:Danio rerio

Alignment Length:62 Identity:13/63 (21%)
Similarity:24/63 (38%) Gaps:10/63 (16%)


  Fly   228 YSGHGHGHGGHEEVKVVKVIHEEGGHSHDHGHSHGGFE-----EVKTIKVIHEDGGHAHGHG 284
            |:|..|...|.:...:.::     |.:.:.|....|.:     ||.::.:......|||..|
Zfish   163 YNGKKHKKNGAQANLLAQL-----GKTLEDGEEMNGLKRSHTCEVCSVTLNSVAQYHAHLQG 219

Known Domains:


GeneSequenceDomainRegion External IDIdentity
CG15731NP_572799.1 None
zmat4bXP_017213517.2 ZnF_U1 15..45 CDD:197732
C2H2 Zn finger 16..38 CDD:275371
C2H2 Zn finger 77..99 CDD:275371
zf-met 77..99 CDD:315537
DUF3449 <111..>199 CDD:331240 7/41 (17%)
ZnF_U1 142..171 CDD:197732 3/8 (38%)
C2H2 Zn finger 146..168 CDD:275371 2/5 (40%)
zf-met 199..222 CDD:315537 6/22 (27%)
C2H2 Zn finger 200..222 CDD:275371 6/21 (29%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_28M81
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

Return to query results.
Submit another query.