DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkcdelta and PRKCA

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_002728.2 Gene:PRKCA / 5578 HGNCID:9393 Length:672 Species:Homo sapiens


Alignment Length:647 Identity:243/647 - (37%)
Similarity:327/647 - (50%) Gaps:110/647 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly  1298 CLRDVDAELDDYIPSSAENSQEDDDDDDD-----------GSGSSSDDYSSV------DG--CAN 1343
            |...|.....:::..|...:.:..|.||.           ||.:..|...|:      .|  |..
Human    70 CCFVVHKRCHEFVTFSCPGADKGPDTDDPRSKHKFKIHTYGSPTFCDHCGSLLYGLIHQGMKCDT 134

  Fly  1344 LSASMKKKL-----------RKEKKKQ---KAKAA------AAAEAKRF---------DPHKKIK 1379
            ...::.|:.           ..||:.:   ||:.|      ...:||..         ||:.|:|
Human   135 CDMNVHKQCVINVPSLCGMDHTEKRGRIYLKAEVADEKLHVTVRDAKNLIPMDPNGLSDPYVKLK 199

  Fly  1380 I--DTTNKCYVKEEAPRYPLVATPRPLWKRE---KIVYSDENTDDESGSEEGSGGSLDEDSDDES 1439
            :  |..|:...|.:..|    :|..|.|...   |:..||:   |...|.|      ..|.|..:
Human   200 LIPDPKNESKQKTKTIR----STLNPQWNESFTFKLKPSDK---DRRLSVE------IWDWDRTT 251

  Fly  1440 GGEECSSTSSSASSEDLDAVAMVTKAGSSNATTVLDSSNSSGSNAGTLSVPSAGSGSGGGASTSS 1504
            ..:...|.|...|.        :.|..:|....:|:.......|     ||.......|......
Human   252 RNDFMGSLSFGVSE--------LMKMPASGWYKLLNQEEGEYYN-----VPIPEGDEEGNMELRQ 303

  Fly  1505 SPSIIRMSTCSNDSGFEGGTAPSSPKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFL 1569
            .....::....|..     .:||..:|.                  |:..:.|.|   :.||:||
Human   304 KFEKAKLGPAGNKV-----ISPSEDRKQ------------------PSNNLDRVK---LTDFNFL 342

  Fly  1570 AVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTF 1634
            .||||||||||:||:.:.|...||||.||||||::||||:.|::|::||||..|.|:|..|...|
Human   343 MVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCF 407

  Fly  1635 QTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLD 1699
            ||...|:|||||:||||||:|||:.|:|.|.:|.||.|||..||.||||:||||||||||||:||
Human   408 QTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLKLDNVMLD 472

  Fly  1700 YEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSP 1764
            .|||::||||||||..:....|..:|||||||:|||||..:.|.::||||::||||||||.||.|
Human   473 SEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPP 537

  Fly  1765 FSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAG--DIADHIFFRPI 1827
            |.|.||||||.||......:|..:|.||..:.|||:.|...||:|.  .|.|  |:.:|.|||.|
Human   538 FDGEDEDELFQSIMEHNVSYPKSLSKEAVSVCKGLMTKHPAKRLGC--GPEGERDVREHAFFRRI 600

  Fly  1828 DWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            ||..||.|:|:|||||:|... ..:.||:.|||.:..|||.|:.::|::||..|.||:|.||
Human   601 DWEKLENREIQPPFKPKVCGK-GAENFDKFFTRGQPVLTPPDQLVIANIDQSDFEGFSYVNP 661

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 181/320 (57%)
PRKCANP_002728.2 C1_cPKC_rpt1 35..92 CDD:410383 3/21 (14%)
C1_cPKC_rpt2 102..155 CDD:410386 7/52 (13%)
C2_PKC_alpha_gamma 159..289 CDD:175992 31/155 (20%)
STKc_cPKC_alpha 328..668 CDD:270766 189/340 (56%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.