DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and aPKC

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001260984.1 Gene:aPKC / 47594 FlyBaseID:FBgn0261854 Length:958 Species:Drosophila melanogaster


Alignment Length:1074 Identity:280/1074 - (26%)
Similarity:382/1074 - (35%) Gaps:373/1074 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly  1050 KSPEQQQATAAAVETKINKTTDKEQQQQQQQQQQQQAQQQQQQLIDTAATLVPQTETKTKLTEAA 1114
            :||.:....|......:.:..::||....||||.||.|||||.          ||          
  Fly    15 RSPRRLTQCAPLPVNIVQQEEEEEQPCLPQQQQHQQTQQQQQS----------QT---------- 59

  Fly  1115 EPTGKSKVQSPNTTKPKSAGKTNV-----GKKKAATPAAAAAAAAAAAPAAATATEAVTALSESN 1174
                     .|:|......|..|:     .:.:.::|...:...:...|.....|.:...|..:.
  Fly    60 ---------CPSTPSANQQGSGNLCYSPTCRSRCSSPCPGSPCGSITPPPPPMLTSSQQHLHSNK 115

  Fly  1175 VTPINADQFITLAPTKAAKTSPNKQQALQLQQQHEEQQRQQQQQATNASSPAATGDATTTPTTIT 1239
            ..|. |.|.:|.....|.:.|        |.|....|.:....||...|.....|          
  Fly   116 NCPA-AQQLMTHLDYAARRQS--------LDQLDSPQSKYFDIQANQLSDIMCRG---------- 161

  Fly  1240 IGVAAVNVAAVAVVASAAAAAATDAAADATTSLSSNNSCGEGVGNNLSKFATVSNLAQCLRDVDA 1304
                       |||:|..               |:||:...||..:...                
  Fly   162 -----------AVVSSIQ---------------SANNTLTRGVSMHSRS---------------- 184

  Fly  1305 ELDDYIPSSAENSQEDDDDDDDGSGSSSDDYSSVDGCANL--------SASMKKKLRKEKKKQKA 1361
                   .||..|...........||:......:.|...:        |..|             
  Fly   185 -------GSAHGSHHGSHHSHSHHGSAHGSLGCLQGGVGVGVGTGSTGSIGM------------- 229

  Fly  1362 KAAAAAEAKRFD-PHKKIKIDTTNKCYVKEEAPRYPLVATPRPLWKREKIVYSDENTDDESGSEE 1425
            .:|...:...:| ||                         |.|.........:.......|.|..
  Fly   230 MSAGHIDTGDYDVPH-------------------------PHPYTHHYMQTTASVTPPHTSLSRP 269

  Fly  1426 GSGGSL----DEDSDDESG---------------GEECSSTSSSASSEDLDAVAMVTKAGSSNAT 1471
            ||.|::    |..||...|               |...|....||.|..|...:  ::..::|.|
  Fly   270 GSAGAVCQGHDSGSDSSQGCGGSIMGGMLVMGHPGHMGSLGHHSAGSGSLGRCS--SRCHNTNTT 332

  Fly  1472 TVLDS---SNSSGSNAGTLS-------VP-------------SAGSGSGG-------GASTSSSP 1506
            |..||   |:..|...||:|       :|             |||||..|       |.|.....
  Fly   333 TTDDSGGGSSGGGGVPGTMSSASMAVGMPGMLMDYHHSHHSGSAGSGLNGCGGGSIAGGSIGGRS 397

  Fly  1507 SIIRMSTCSNDSGFEG------------------------GTAPSS---------PKKMLETSY- 1537
            |:  :.|..|..|...                        |.||||         .::.:|.:| 
  Fly   398 SV--LGTIHNGHGHHHQQYHHECIHYERLPIPVPIPTVPMGVAPSSQQMSQHQLQSEEEIEPAYA 460

  Fly  1538 ---------------------------------------------------TYSQ---------- 1541
                                                               .|.|          
  Fly   461 TVFPNVPQAPGLSCDGEDRSIYRRGARRWRKLYRVNGHIFQAKRFNRRAFCAYCQDRIWGLGRQG 525

  Fly  1542 -----------------FQK-----------------SGRFTAPATVIP---------------- 1556
                             .||                 |.....|...:|                
  Fly   526 FKCIQCKLLVHKKCHKLVQKHCTDQPEPLVKERAEESSDPIPVPLPPLPYEAMSGGAEACETHDH 590

  Fly  1557 ----------------RFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLED 1605
                            ..:.||::||..:.|:|:||:.|||:.|||.|...||:|.:||.:|.:|
  Fly   591 AHIVAPPPPEDPLEPGTQRQYSLNDFELIRVIGRGSYAKVLMVELRRTRRIYAMKVIKKALVTDD 655

  Fly  1606 DDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFY 1670
            :|:|....|:.|....:.||:|..|...|||.|.||||:|::.|||||:|:|...|..||.||||
  Fly   656 EDIDWVQTEKHVFETASNHPFLVGLHSCFQTPSRLFFVIEFVRGGDLMYHMQRQRRLPEEHARFY 720

  Fly  1671 GAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPE 1735
            .|||...|.|||:||||||||||||||||:|||:::.|:||||..|....|..:|||||:|:|||
  Fly   721 AAEISLALNFLHEKGIIYRDLKLDNVLLDHEGHIKLTDYGMCKEGIRPGDTTSTFCGTPNYIAPE 785

  Fly  1736 IIKGEKYNQNVDWWSFGVLLYEMLIGQSPF--SGCD-------EDELFWSICNEIPWFPVYISAE 1791
            |::||.|..:||||:.||||||||.|:|||  :|..       ||.||..|..:....|..:|..
  Fly   786 ILRGEDYGFSVDWWALGVLLYEMLAGRSPFDLAGASENPDQNTEDYLFQVILEKTIRIPRSLSVR 850

  Fly  1792 ATGILKGLLEKDYTKRIGSQYSPA-GDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFD 1855
            |..:|||.|.|:...|:|.....| .||..|.||:.:||.|||::|:.|||||::....|...|.
  Fly   851 AASVLKGFLNKNPADRLGCHRESAFMDIVSHPFFKNMDWELLERKQVTPPFKPRLDSDRDLANFP 915

  Fly  1856 RVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            ..||.|.|:|||.|..::.::||.:|.||.|.||
  Fly   916 PEFTGEAVQLTPDDDHVIDNIDQSEFEGFEYVNP 949

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904 20/80 (25%)
STKc_nPKC_theta_like 1570..1889 CDD:270744 160/328 (49%)
aPKCNP_001260984.1 C1_aPKC 496..550 CDD:410344 4/53 (8%)
STKc_aPKC 620..947 CDD:270740 159/326 (49%)

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