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Protein Alignment Pkcdelta and prkcbb

DIOPT Version :10

Sequence 1:	NP_572797.3	Gene:	Pkcdelta / 32191	FlyBaseID:	FBgn0287828	Length:	1894	Species:	Drosophila melanogaster
Sequence 2:	NP_957272.1	Gene:	prkcbb / 393953	ZFINID:	ZDB-GENE-040426-1178	Length:	670	Species:	Danio rerio

Alignment Length:	558	Identity:	224/558 - (40%)
Similarity:	294/558 - (52%)	Gaps:	51/558 - (9%)

- Green bases have known domain annotations that are detailed below.

  Fly  1334 DYSSVDGCANLSASMKKKLRKEKKKQKAKAAAAAEAKRFDPHKKIKIDTTNKCYVKEEAPRYPLV 1398
            |::...|...::|.:|..:.....|:.............||:.|:|:....|...|::..  .:.
Zfish   153 DHTERRGRIQITAEIKNNVLTVSIKEAKNLVPMDPNGLSDPYVKLKLIPDPKSESKQKTK--TIK 215

  Fly  1399 ATPRPLWKREKIVYSDENTDDESGSEEGSGGSLDEDSDDESGGEECSSTSSSASSEDLDAVAMVT 1463
            ....|.|.........|:..|...|.|      ..|.|..|..:...|.|...|.        :.
Zfish   216 CCLNPTWNETFTFNLKESDKDRRLSVE------IWDWDLTSRNDFMGSLSFGISE--------LQ 266

  Fly  1464 KAGSSNATTVLDSSNSSGSNAGTLSVPSAGSGSGGGASTSSSPSIIRMSTCSNDSGFEGGTAPSS 1528
            |.|......:|........|     ||....|..|...........::.....|.
Zfish   267 KQGVDGWFKLLSQEEGEYFN-----VPVPPEGEEGNEELRQKFERAKIGPSKTDG---------- 316

  Fly  1529 PKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYA 1593
                 .:|...|:|..:|.       ..|.|   :.||:||.||||||||||:|||.:.....:|
Zfish   317 -----SSSNAISKFDSNGN-------RDRMK---LSDFNFLMVLGKGSFGKVMLAERKGADELFA 366

  Fly  1594 IKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQE 1658
            ||.||||||::||||:.|::|::||||..|.|:|..|...|||...|:|||||:||||||:|||:
Zfish   367 IKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCFQTMDRLYFVMEYINGGDLMYHIQQ 431

  Fly  1659 SGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTAD 1723
            .|:|.|..|.||.|||..||.|||.||:||||||||||:||.|||::||||||||..:....|..
Zfish   432 VGKFKEPHAVFYAAEIAIGLFFLHSKGVIYRDLKLDNVMLDAEGHIKIADFGMCKENMLDGVTTK 496

  Fly  1724 SFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYI 1788
            :|||||||:|||||..:.|.::||||:|||||||||.||.||.|.||||||.||......:|..:
Zfish   497 TFCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIMEHHVSYPKSM 561

  Fly  1789 SAEATGILKGLLEKDYTKRIGSQYSPAG--DIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDT 1851
            |.||..|.|||:.|...||:|.  .|.|  ||.:|.|||.:||..||.|:::|||||:. ...|.
Zfish   562 SKEAVAICKGLMTKHPGKRLGC--GPEGERDIREHGFFRYMDWEKLEHREVQPPFKPKA-CGRDA 623

  Fly  1852 QYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            :.|||.|||....|||.|:|::.::||.:|.||::.||
Zfish   624 ENFDRFFTRHPPVLTPPDQEVIMNLDQDEFEGFSFINP 661

Known Domains:

Indicated by green bases in alignment.

Software error:

Illegal division by zero at /www/www.flyrnai.org/docroot/cgi-bin/DRSC_prot_align.pl line 592.

For help, please send mail to the webmaster (ritg@hms.harvard.edu), giving this error message and the time and date of the error.