DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Prkcz

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_032886.2 Gene:Prkcz / 18762 MGIID:97602 Length:592 Species:Mus musculus


Alignment Length:335 Identity:158/335 - (47%)
Similarity:219/335 - (65%) Gaps:8/335 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly  1563 VDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYL 1627
            :.||..:.|:|:||:.||||..|:.....||:|.:||::|.:|:|:|....|:.|....:.:|:|
Mouse   249 LQDFDLIRVIGRGSYAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFL 313

  Fly  1628 CHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLK 1692
            ..|...|||.|.||.|:||:||||||||:|...:..||.||||.|||...|.|||::||||||||
Mouse   314 VGLHSCFQTTSRLFLVIEYVNGGDLMFHMQRQRKLPEEHARFYAAEICIALNFLHERGIIYRDLK 378

  Fly  1693 LDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYE 1757
            |||||||.:||:::.|:||||..:....|..:|||||:|:||||::||:|..:||||:.|||::|
Mouse   379 LDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCGTPNYIAPEILRGEEYGFSVDWWALGVLMFE 443

  Fly  1758 MLIGQSPFSGC-------DEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQ-YSP 1814
            |:.|:|||...       .||.||..|..:....|.::|.:|:.:|||.|.||..:|:|.: .:.
Mouse   444 MMAGRSPFDIITDNPDMNTEDYLFQVILEKPIRIPRFLSVKASHVLKGFLNKDPKERLGCRPQTG 508

  Fly  1815 AGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQK 1879
            ..||..|.|||.|||.||||:|..|||:||:........||..||.|.|:|||.|::::..:||.
Mouse   509 FSDIKSHAFFRSIDWDLLEKKQTLPPFQPQITDDYGLDNFDTQFTSEPVQLTPDDEDVIKRIDQS 573

  Fly  1880 QFHGFTYTNP 1889
            :|.||.|.||
Mouse   574 EFEGFEYINP 583

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 154/326 (47%)
PrkczNP_032886.2 PB1_aPKC 16..98 CDD:99725
Interaction with SQSTM1. /evidence=ECO:0000250 79..145
C1 129..183 CDD:412127
Protein Kinases, catalytic domain 236..592 CDD:473864 158/335 (47%)
Blue background indicates that the domain is not in the aligned region.

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