DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Prkci

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_032883.2 Gene:Prkci / 18759 MGIID:99260 Length:595 Species:Mus musculus


Alignment Length:384 Identity:167/384 - (43%)
Similarity:232/384 - (60%) Gaps:26/384 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly  1516 NDSGFEGGTAPSSPKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKV 1580
            |.|..|........|:.:.|       ::||:.::         :..:.||..|.|:|:||:.||
Mouse   219 NPSSHESLDQVGEEKEAMNT-------RESGKASS---------SLGLQDFDLLRVIGRGSYAKV 267

  Fly  1581 LLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVME 1645
            ||..|:.|...||:|.:||::|.:|:|:|....|:.|....:.||:|..|...|||||.||||:|
Mouse   268 LLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFFVIE 332

  Fly  1646 YLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFG 1710
            |:||||||||:|...:..||.||||.|||...|.:||::|||||||||||||||.|||:::.|:|
Mouse   333 YVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYG 397

  Fly  1711 MCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPF---SGCD--- 1769
            |||..:....|..:|||||:|:||||::||.|..:||||:.|||::||:.|:|||   ...|   
Mouse   398 MCKEGLRPGDTTSTFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPD 462

  Fly  1770 ---EDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQ-YSPAGDIADHIFFRPIDWG 1830
               ||.||..|..:....|..:|.:|..:||..|.||..:|:|.. .:...||..|.|||.:||.
Mouse   463 QNTEDYLFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKERLGCHPQTGFADIQGHPFFRNVDWD 527

  Fly  1831 LLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPIDKEILASMDQKQFHGFTYTNP 1889
            ::|::|:.|||||.:........||..||.|.|:|||.|.:|:..:||.:|.||.|.||
Mouse   528 MMEQKQVVPPFKPNISGEFGLDNFDSQFTNEPVQLTPDDDDIVRKIDQSEFEGFEYINP 586

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 155/328 (47%)
PrkciNP_032883.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1..21
Regulatory domain. /evidence=ECO:0000250 2..252 7/48 (15%)
Required for interaction with RAB2. /evidence=ECO:0000250 2..28
PB1_aPKC 26..108 CDD:99725
Interaction with PARD6A. /evidence=ECO:0000250 72..91
Pseudosubstrate 125..134
C1_aPKC 139..193 CDD:410344
STKc_aPKC_iota 232..595 CDD:270769 164/371 (44%)
Blue background indicates that the domain is not in the aligned region.

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