DRSC/TRiP Functional Genomics Resources

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Protein Alignment Pkcdelta and Prkca

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:XP_036012317.1 Gene:Prkca / 18750 MGIID:97595 Length:688 Species:Mus musculus


Alignment Length:539 Identity:226/539 - (41%)
Similarity:295/539 - (54%) Gaps:76/539 - (14%)


- Green bases have known domain annotations that are detailed below.


  Fly  1373 DPHKKIKI--DTTNKCYVKEEAPRYPLVATPRPLWKRE---KIVYSDENTDDESGSEEGSGGSLD 1432
            ||:.|:|:  |..|:...|.:..|    :|..|.|...   |:..||:   |...|.|      .
Mouse   193 DPYVKLKLIPDPKNESKQKTKTIR----STLNPQWNESFTFKLKPSDK---DRRLSVE------I 244

  Fly  1433 EDSDDESGGEECSSTSSSASSEDLDAVAMVTKAGSSNATTVLDSSNSSGSNAGTLSVPSAGSGSG 1497
            .|.|..:..:...|.|...|.        :.|..:|....:|:.......|     ||.......
Mouse   245 WDWDRTTRNDFMGSLSFGVSE--------LMKMPASGWYKLLNQEEGEYYN-----VPIPEGDEE 296

  Fly  1498 GGASTSSSPSIIRMSTCSNDSGFEGGTAPSSPKKMLETSYTYSQFQKSGRFTAPATVIPRFKNYS 1562
            |...........::....|..     .:||..:|.                  |:..:.|.|   
Mouse   297 GNMELRQKFEKAKLGPAGNKV-----ISPSEDRKQ------------------PSNNLDRVK--- 335

  Fly  1563 VDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIERKVLALGTKHPYL 1627
            :.||:||.||||||||||:||:.:.|...||||.||||||::||||:.|::|::||||..|.|:|
Mouse   336 LTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFL 400

  Fly  1628 CHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISGLKFLHKKGIIYRDLK 1692
            ..|...|||...|:|||||:||||||:|||:.|:|.|.:|.||.|||..||.||||:||||||||
Mouse   401 TQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISIGLFFLHKRGIIYRDLK 465

  Fly  1693 LDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYMAPEIIKGEKYNQNVDWWSFGVLLYE 1757
            ||||:||.|||::||||||||..:....|..:|||||||:|||||..:.|.::||||::||||||
Mouse   466 LDNVMLDSEGHIKIADFGMCKEHMMDGVTTRTFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYE 530

  Fly  1758 MLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTKRIGSQYSPAG--DIAD 1820
            ||.||.||.|.||||||.||......:|..:|.||..|.|||:.|...||:|.  .|.|  |:.:
Mouse   531 MLAGQPPFDGEDEDELFQSIMEHNVSYPKSLSKEAVSICKGLMTKHPAKRLGC--GPEGERDVRE 593

  Fly  1821 HIFFRPIDWGLLEKRQIEPPFKPQV-----KHPLD----------TQYFDRVFTRERVRLTPIDK 1870
            |.|||.|||..||.|:|:|||||:|     .|.|.          .:.||:.|||.:..|||.|:
Mouse   594 HAFFRRIDWEKLENREIQPPFKPKVTFCTKMHWLQWASRPSCGKGAENFDKFFTRGQPVLTPPDQ 658

  Fly  1871 EILASMDQKQFHGFTYTNP 1889
            .::|::||..|.||:|.||
Mouse   659 LVIANIDQSDFEGFSYVNP 677

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 184/335 (55%)
PrkcaXP_036012317.1 C1_cPKC_rpt1 35..92 CDD:410383
C1_cPKC_rpt2 102..155 CDD:410386
C2_PKC_alpha_gamma 159..289 CDD:175992 26/121 (21%)
STKc_cPKC_alpha 328..684 CDD:270766 192/355 (54%)
Blue background indicates that the domain is not in the aligned region.

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