DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkcdelta and Prkacb

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001157672.1 Gene:Prkacb / 18749 MGIID:97594 Length:398 Species:Mus musculus


Alignment Length:398 Identity:137/398 - (34%)
Similarity:216/398 - (54%) Gaps:21/398 - (5%)


- Green bases have known domain annotations that are detailed below.


  Fly  1479 SSGSNAGTLSVPSAGSGSGGGAS----TSSSPSIIRMSTCSNDSGFEGGTAPSS-PKKMLE-TSY 1537
            |||.::||   |:|.....|.||    ..|..:.........|.|.......:| .|.|.| .:.
Mouse     8 SSGQHSGT---PTALQKLEGFASRLFHRHSRGTAQEHRAALEDDGLRASEHTASWDKSMKEFLAK 69

  Fly  1538 TYSQFQKSGRFTAPATVIPRFKNYSVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVV 1602
            ....|.:......|:       |..::||.....||.||||:|:|.:.:.|..|||:|.|.|..|
Mouse    70 AKEDFLRKWENPPPS-------NAGLEDFERKKTLGTGSFGRVMLVKHKATEQYYAMKILDKQKV 127

  Fly  1603 LEDDDVDSTLIERKVLALGTKHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERA 1667
            ::...::.||.|:::|. ..:.|:|..|..:|:..|:|:.||||:.||::..|::..|||||..|
Mouse   128 VKLKQIEHTLNEKRILQ-AVEFPFLVRLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHA 191

  Fly  1668 RFYGAEIISGLKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQIYLDKTADSFCGTPDYM 1732
            |||.|:|:...::||...:||||||.:|:|:|::|::::.|||..|   .:.....:.||||:|:
Mouse   192 RFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDHQGYIQVTDFGFAK---RVKGRTWTLCGTPEYL 253

  Fly  1733 APEIIKGEKYNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILK 1797
            |||||..:.||:.||||:.|||:|||..|..||......:::..|.:....||.:.|::...:|:
Mouse   254 APEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSSDLKDLLR 318

  Fly  1798 GLLEKDYTKRIGSQYSPAGDIADHIFFRPIDWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRER 1862
            .||:.|.|||.|:..:...||..|.:|...||..:.:|::|.||.|:.:...||..||. :..|.
Mouse   319 NLLQVDLTKRFGNLKNGVSDIKTHKWFATTDWIAIYQRKVEAPFIPKFRGSGDTSNFDD-YEEEE 382

  Fly  1863 VRLTPIDK 1870
            :|::..:|
Mouse   383 IRVSITEK 390

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 115/301 (38%)
PrkacbNP_001157672.1 STKc_PKA 89..378 CDD:271111 114/293 (39%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.