DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Pkcdelta and pkn-1

DIOPT Version :10

Sequence 1:NP_572797.3 Gene:Pkcdelta / 32191 FlyBaseID:FBgn0287828 Length:1894 Species:Drosophila melanogaster
Sequence 2:NP_001360642.1 Gene:pkn-1 / 181244 WormBaseID:WBGene00009793 Length:1137 Species:Caenorhabditis elegans


Alignment Length:864 Identity:233/864 - (26%)
Similarity:387/864 - (44%) Gaps:184/864 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly  1181 DQFITLAPTKAAKTSPNKQQALQLQQQHEEQQRQQQQQATNASSPAATGDATTTPTTITIGVAAV 1245
            :||:..||.| :|...:.|..|...:......|.|.::.:. .:||..|:..|     .:.:|..
 Worm   298 EQFLRGAPDK-SKVHGDSQSLLDDSRAKIAMLRMQIERLSQ-EAPAVEGEPKT-----KVELAID 355

  Fly  1246 NVAAVAVVASAAAAAATDAAADATTSL-SSNNSCGEGVGNNLSKFATVSNLAQCLR--------D 1301
            ::    ::.........|.:.:....| |......:.|...::.:...|..|..::        .
 Worm   356 DL----IIRFHKEKLIMDGSRNMIRILRSKRKPDSKAVDEAMNSYVIASEKADLIKLALLKYASS 416

  Fly  1302 VDAELD--DYI-----------PSSAENSQEDDDDDDDGSGSSSD------DYS---------SV 1338
            :..|.|  .|:           |.|....:.....:|.|:|:|:.      .||         ::
 Worm   417 LPLEHDHRKYLIGEINSGLIPKPPSLSQDRNSPSSEDGGNGTSTSRRCSFMPYSLQISGCLEVTI 481

  Fly  1339 DGCAN-LSASMKKKLRKE-----------------KKKQKAKAAAAAEA--------KRF----- 1372
            :|||. ||...::|:||:                 |||:.|:...::|.        .||     
 Worm   482 NGCAGILSEVFERKIRKDVPGVPGFISVYGMDASGKKKKSARGPNSSEEVFCVLRIDNRFIGATE 546

  Fly  1373 -----------------DPHKKIK----------------------IDTTNKC------------ 1386
                             |..::::                      |:|::|.            
 Worm   547 LRKIVDRNWDQKFDVDLDRSRELQIELFYHDDRSMCGFAAVKLSNLIETSSKVGIIVPVEPQGNI 611

  Fly  1387 -----YVKEEAPRYPLVATPRPLWK--------REKI-VYSDENTDDESGSEEGSGGS------- 1430
                 |:.....|.|.:...|.|::        |:|: |::........|:|.....:       
 Worm   612 FVQFKYMNPVVSRKPKLERQRRLFRVKESNDGARQKLGVFAFSRLIKNRGNEPSEKFAAFTGFTP 676

  Fly  1431 LDEDSDDESGGEECSSTSSSASSEDLDAVAMVTKAGSSNATTVLDSSNSSGSNAGTLSVPSAGSG 1495
            :...|.....|...|..|:|:|      :|......:||:.....|::....|....:.......
 Worm   677 MPSSSSQHQPGTSSSGPSTSSS------IASTPTPSTSNSLFDKVSNHLPSFNPRKSAKKREARE 735

  Fly  1496 SGGGASTSSSPSIIRMSTCSNDSGFEGGTAPSSPKKMLETSYTYSQF--QKSGRFTAPATVIPRF 1558
            :...|..:::.:.:.::..|..:..:    ||:.::.|    ...:|  .:||...||.....|.
 Worm   736 AAAVAPMTAAVAAVNLNAPSTSNSMQ----PSTQERNL----VVDEFPTDRSGPSQAPPVPAVRH 792

  Fly  1559 KNY---------SVDDFHFLAVLGKGSFGKVLLAELRDTTYYYAIKCLKKDVVLEDDDVDSTLIE 1614
            .::         :|:.|..::|||:|.||||:|::...|:.|||:|.|||..:|..|:|:|.::|
 Worm   793 IDFFASSDGAPLTVEQFRLISVLGRGHFGKVILSQHNPTSNYYALKVLKKGDILGRDEVESLMVE 857

  Fly  1615 RKVLALGT--KHPYLCHLFCTFQTESHLFFVMEYLNGGDLMFHIQESGRFSEERARFYGAEIISG 1677
            :::..:.:  :||:|.:|...|||..|:||.|||..|||||.||.:. .|.|.|..||.|.::.|
 Worm   858 KRIFEVSSRARHPFLVNLNGCFQTNEHVFFCMEYSMGGDLMRHIHDD-VFDEVRGCFYAACVVLG 921

  Fly  1678 LKFLHKKGIIYRDLKLDNVLLDYEGHVRIADFGMCKLQI-YLDKTADSFCGTPDYMAPEIIKGEK 1741
            |.||||..|||||:||||:|||.||:|:|||||:||..: ..|||: :|||||:::|||::....
 Worm   922 LDFLHKHNIIYRDIKLDNLLLDREGYVKIADFGLCKENMGPFDKTS-TFCGTPEFLAPEVLSDSS 985

  Fly  1742 YNQNVDWWSFGVLLYEMLIGQSPFSGCDEDELFWSICNEIPWFPVYISAEATGILKGLLEKDYTK 1806
            |.:.:|||..|||::|||:|:.||||.||:|:|.||.:|...:|.|:|.|:..|::.||.|...|
 Worm   986 YTRAIDWWGLGVLIFEMLVGEPPFSGDDEEEIFDSIISEDVRYPRYLSVESIAIMRRLLRKVPEK 1050

  Fly  1807 RIGSQYSPAGDIADHIFFRPI--DWGLLEKRQIEPPFKPQVKHPLDTQYFDRVFTRERVRLTPID 1869
            |:|.....|.||....|||.|  :|..|..|:|.|||:||:::|.|...||..||:|:.|.:...
 Worm  1051 RLGYGERDAEDIKIQRFFRHISWEWDKLLNREIRPPFQPQIRNPEDVSNFDLEFTQEKARFSAAS 1115

  Fly  1870 K-EILASMDQKQFHGFTYT 1887
            . ..:...||:.|:.|.::
 Worm  1116 STRPITEADQRLFNNFDFS 1134

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
PkcdeltaNP_572797.3 Herpes_BLLF1 <802..1131 CDD:282904
STKc_nPKC_theta_like 1570..1889 CDD:270744 148/324 (46%)
pkn-1NP_001360642.1 HR1_PKN_1 188..253 CDD:212012
HR1_PKN_2 273..339 CDD:212013 10/42 (24%)
HR1 344..410 CDD:469609 9/74 (12%)
C2 527..>589 CDD:472691 4/61 (7%)
STKc_PKN 809..1134 CDD:270741 149/326 (46%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.