DRSC/TRiP Functional Genomics Resources

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Protein Alignment Uch-L5R and Uch

DIOPT Version :10

Sequence 1:NP_572781.1 Gene:Uch-L5R / 32173 FlyBaseID:FBgn0030370 Length:340 Species:Drosophila melanogaster
Sequence 2:NP_476940.1 Gene:Uch / 33397 FlyBaseID:FBgn0010288 Length:227 Species:Drosophila melanogaster


Alignment Length:233 Identity:66/233 - (28%)
Similarity:102/233 - (43%) Gaps:23/233 - (9%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 WCLIESDPGVFTEMISGFGCTGA-EVEEIWSIKADAFRHL-EPIHGLIFLFKWLDDKPAGRVVT- 86
            |..:||:|.|.|:.|...|.:.| .|.::..::.|....: .|:...|.||...:.....|... 
  Fly     4 WTPLESNPEVLTKYIHKLGVSPAWSVTDVIGLEDDTLEWIPRPVKAFILLFPCSETYEKHRAEEH 68

  Fly    87 DR---------SDIFFARQVIPNACATQALLCLLLNLQHEDIDLGQTLTDLRNLCQDLDPECRGH 142
            ||         .|:|:.||...|||.|.||:..:.|.:..|||.| .|.|.......|.||.||.
  Fly    69 DRIKEVEEQHPEDLFYMRQFTHNACGTVALIHSVANNKEVDIDRG-VLKDFLEKTASLSPEERGR 132

  Fly   143 RLANEEKIRKVHNSFARPELFVVEESTDFI--EDDCYHFVGFMPIKGKLFELDGMHEGPIELADI 205
            .|..:||....|.:.|:      |..|:..  |...:||:..:..:|.|:||||....||:....
  Fly   133 ALEKDEKFTADHEALAQ------EGQTNAANHEKVIHHFIALVNKEGTLYELDGRKSFPIKHGPT 191

  Fly   206 DQQQNWLDVVRPIIEARMERYSVGEIHFNLMALVSDRQ 243
            .::....|..: :.:..|.| ...|:.|.::||.:.:|
  Fly   192 SEETFVKDAAK-VCKEFMAR-DPNEVRFTVLALTAAQQ 227

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Uch-L5RNP_572781.1 Peptidase_C12_UCH37_BAP1 25..238 CDD:187738 63/226 (28%)
UCH_C 269..314 CDD:465622
UchNP_476940.1 Peptidase_C12_UCH_L1_L3 4..222 CDD:187737 63/226 (28%)
Blue background indicates that the domain is not in the aligned region.

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