DRSC/TRiP Functional Genomics Resources

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Protein Alignment: HOXB5 and ro

Sequence 1:NP_002138.1 Gene:HOXB5 HGNCID:5116 Length:269 Species:Homo sapiens
Sequence 2:NP_524521.1 Gene:ro FlyBaseID:FBgn0003267 Length:350 Species:Drosophila melanogaster

Alignment Length:202 Identity:64/203 (32%)
Similarity:84/203 (41%) Gaps:48/203 (24%)


Human    98 ESLPCTNGD----SHGAKP------------SASSP----SDQATSASSSANFTEID-EASASSE 141
            |:....||:    :|..||            |.|||    ||:.||.   |.:...| ...|...
  Fly    53 ETRSSENGEIDVGTHAHKPPPCDTPYHSDGGSVSSPDISISDERTSL---AAYPAYDFYGHAKDY 114

Human   142 PEEAAS-------------QLSSPSLARAQPEPMATSTAAPEGQTPQIFP--WMRKLHISHDMTG 191
            |:..:.             ||....|:...|.|...:..|.....|..||  :....|.|...:.
  Fly   115 PQHPSQQHQQHHHHHHHPPQLVHQKLSYVSPPPAIAAGGAANPVLPHAFPAGFPSDPHFSAGFSA 179

Human   192 -------PDG--KRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLSERQIKIWFQNRRM 247
                   .:|  :|.||.::..|||.||.|||.|.|::|.||.|:|..|.|:|.||||||||||.
  Fly   180 FLARRRRKEGRQRRQRTTFSTEQTLRLEVEFHRNEYISRSRRFELAETLRLTETQIKIWFQNRRA 244

Human   248 KWKKDNK 254
            |.|:..|
  Fly   245 KDKRIEK 251

Known Domains:


GeneSequenceDomainRegion External IDIdentity
HOXB5NP_002138.1 DNA_pol3_gamma3 <67..>171 CDD:331207 24/107 (22%)
Antp-type hexapeptide 176..181 2/7 (29%)
Homeobox 198..250 CDD:306543 31/52 (60%)
roNP_524521.1 Homeobox 196..247 CDD:278475 30/51 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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