DRSC/TRiP Functional Genomics Resources

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Protein Alignment: HOXB5 and ind

Sequence 1:NP_002138.1 Gene:HOXB5 HGNCID:5116 Length:269 Species:Homo sapiens
Sequence 2:NP_996087.2 Gene:ind FlyBaseID:FBgn0025776 Length:320 Species:Drosophila melanogaster

Alignment Length:216 Identity:77/217 (35%)
Similarity:101/217 (47%) Gaps:41/217 (19%)


Human    43 GSYGYNYNGMDLSVNRSSASSSHFGAVGESSRAFPAP--AQEPRFRQAASSCSL-SSP--ESLPC 102
            ||..:.|..:..|..:||..|::.|       .:|:|  :..|..:|.....:| .||  ..||.
  Fly   103 GSLYHPYAQLFASKRKSSGFSNYEG-------CYPSPPLSANPNSQQLPPIHNLYGSPVVGGLPL 160

Human   103 TNGDSHGAKPSASSPSDQATSASSSANFT-EIDEASASS-EPEEAASQLSSPSLARAQPEPMATS 165
            ....|....|||||        |:|.::| ..||..... :.|.:.|..|||....        |
  Fly   161 PEPGSFCTSPSASS--------SASLDYTNNFDEPQGKRFKHESSCSPNSSPLKNH--------S 209

Human   166 TAAPEGQTPQIFPWMRKLHISHDMTGPDGKRARTAYTRYQTLELEKEFHFNRYLTRRRRIEIAHA 230
            :..|...||.|..:           ....||.|||:|..|.||||:||..|.||:|.||||||:.
  Fly   210 SGGPVEITPLINDY-----------ADSSKRIRTAFTSTQLLELEREFSHNAYLSRLRRIEIANR 263

Human   231 LCLSERQIKIWFQNRRMKWKK 251
            |.|||:|:||||||||:|.||
  Fly   264 LRLSEKQVKIWFQNRRVKQKK 284

Known Domains:


GeneSequenceDomainRegion External IDIdentity
HOXB5NP_002138.1 DNA_pol3_gamma3 <67..>171 CDD:331207 28/111 (25%)
Antp-type hexapeptide 176..181 1/5 (20%)
Homeobox 198..250 CDD:306543 35/52 (67%)
indNP_996087.2 Homeobox 231..283 CDD:278475 35/52 (67%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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