DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and cyp3a4.2

DIOPT Version :10

Sequence 1:NP_572752.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_001015786.1 Gene:cyp3a4.2 / 548503 XenbaseID:XB-GENE-971750 Length:504 Species:Xenopus tropicalis


Alignment Length:537 Identity:136/537 - (25%)
Similarity:234/537 - (43%) Gaps:87/537 - (16%)


- Green bases have known domain annotations that are detailed below.


  Fly     3 GSLLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRN 67
            |:.:| :|.||..|..:.:..:|::::.|:..|..||..|:|...   |:.......:.:..|..
 Frog    10 GTWIL-LAALLVLILLYGIWPYGYFKKMGIPGPTPLPFIGTFLEF---RKGMVQFDTECFKKYGK 70

  Fly    68 THSYVGCYLLRAPKLLVLEPRLVYEIYV-SAFSHFENNDASKMVDIAKDRLVALN-PF-----VL 125
            ..   |.|..|.|.|.:::|.::..|.| ..:::|.|.           |...|| ||     :.
 Frog    71 MW---GTYDGRQPVLAIMDPAIIKTILVKECYTNFTNR-----------RNFGLNGPFESAITIA 121

  Fly   126 EGEEWRHQRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGG---KDLDCIDLGLRFTGES 187
            |.|:|:..|.|.|...|:|:::....||:    |... |.:|:..|   ||..|....:  .|..
 Frog   122 EDEQWKRIRNVLSPTFTSGKLKEMFQIMK----DYSD-ILVKNIQGYVEKDEPCATKDV--IGAY 179

  Fly   188 LFDCVLGIQARTFTDNPLPVVRQNHEMSAENRGLAIAGAVHGL------FPNLPRWLRP------ 240
            ..|.   |.:.:|:.|...:.:.:.......:.|...|.:..|      ||    :|||      
 Frog   180 SMDV---ITSTSFSVNIDSLNKPSDPFVIHMKKLLKTGLLSPLLILVVIFP----FLRPILEGLN 237

  Fly   241 -KVFPRSHDRFYGQMISEALRLRRSK--HQERNDFINHLLEMQ---------RELDLSEEDMASH 293
             ...|:....|:...:: :.|.:|.|  |..|.|.:..:::.:         :...|::.::.:.
 Frog   238 LNFVPKDFTEFFMNAVT-SFREKRKKGDHSGRVDLLQLMMDSRTTGGNDLSNKHKALTDAEIMAQ 301

  Fly   294 AMTFMFDGLDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFNES 358
            ::.|:..|.:|||.::::....|..:||.|:||:||:....|....|..|.|:.:.||.....|:
 Frog   302 SVIFIVAGYETTSTALSYLFYNLATHPDVQQRLHEEIDSFLPDKASPTYDILMQMEYLDMVIQET 366

  Fly   359 LRIYPAGGWASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDG 423
            ||::|..|...:...:..|:.|      :.:..|...::|.|.|..||:.:|||:.||||||   
 Frog   367 LRLFPPAGRLERVSKQNVEING------VSIPKGIVTLIPAYVLQRDPEYWPEPEEFRPERF--- 422

  Fly   424 GLKNCKQQG------IFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELDPL 482
                .|:..      .||.||:|||.|:|:|..|...|.|:..::|.|.|.....||...|...:
 Frog   423 ----SKENRATHTPFTFLPFGDGPRNCIGLRFALLSMKVAIVTLLQNFSVRPCAETLIPMEFSTI 483

  Fly   483 IFVGVHKGGIWLQFVPR 499
            .|:...| .|.|:|:.|
 Frog   484 GFLQPKK-PIVLKFLSR 499

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_572752.1 CYP6-like 67..493 CDD:410679 117/465 (25%)
cyp3a4.2NP_001015786.1 CYP3A 67..495 CDD:410743 119/470 (25%)

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