DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and Cyp6u1

DIOPT Version :10

Sequence 1:NP_572752.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:NP_610252.3 Gene:Cyp6u1 / 35608 FlyBaseID:FBgn0033121 Length:488 Species:Drosophila melanogaster


Alignment Length:494 Identity:124/494 - (25%)
Similarity:215/494 - (43%) Gaps:57/494 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     9 IATLLGA---IYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRNTHS 70
            :.|.|||   :||.:..:.|:|:|||:...:...|:|:...::..::|....::|||..|:....
  Fly     8 LLTALGALSVVYALVKFSLGYWKRRGILHEKPKFLWGNIKGVVSGKRHAQDALQDIYTAYKGRAP 72

  Fly    71 YVGCYLLRAPKLLVLEPRLVYEIYVSAFSHFENNDASKMVDIAKDRLVALNPFVLEGEEWRHQRA 135
            :||.|....|.:|.|:.:||::|..:...||.:..   :........::.|...|:|.:||...|
  Fly    73 FVGFYACLKPFILALDLKLVHQIIFTDAGHFTSRG---LYSNPSGEPLSHNLLQLDGHKWRSLHA 134

  Fly   136 VFSTLLTNGRIRTTHAIMQRVCLDLCQFIA--IKSAGGKDLDCIDLGL---RFTGESLFDCVLGI 195
            ..:.:.       |.|.||::.:.|.|..:  .:..|.|.|..|::..   .:..:.:.....|:
  Fly   135 KSAEVF-------TPANMQKLLVRLSQISSRIQRDLGEKSLQTINISELVGAYNTDVMASMAFGL 192

  Fly   196 QARTFTDNPLPVVRQNHEMSAENRG-----------LAIAGAVHGLFPNLPRWLRPKVFPRSHDR 249
                       |.:.|.|.:...|.           ||:.      ||.:.|.|:.|.:......
  Fly   193 -----------VGQDNVEFAKWTRNYWADFRMWQAYLALE------FPLIARLLQYKSYAEPATA 240

  Fly   250 FYGQMISEALRL-RRSKHQERNDFINHLLEMQRELDLSEEDMASHAMTFMFDGLDTTSNSIAHCL 313
            ::.::....|:| ||...|....|:.  |....|..|::.::|..|..|:..||...:.::|.||
  Fly   241 YFQKVALSQLQLHRRRDRQPLQTFLQ--LYSNAEKPLTDIEIAGQAFGFVLAGLGPLNATLAFCL 303

  Fly   314 LLLGRNPDCQRRLYEELQ--LVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGGWASKTCTKEY 376
            ..|.|.|:.|.|...|:.  |...||.:.. :.|.:|.|.....||:||::....:..:..|||:
  Fly   304 YELARQPEVQDRTRLEINKALEEHGGQVTP-ECLRELRYTKQVLNETLRLHTPHPFLLRRATKEF 367

  Fly   377 ELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQGIFLGFGNGP 441
            |:.||    ...:..|::|::|..|:|.||.:|..|..|.|||| :...:..:....||.||:|.
  Fly   368 EVPGS----VFVIAKGNNVLIPTAAIHMDPGIYENPQRFYPERF-EEQARRSRPAAAFLPFGDGL 427

  Fly   442 RQCVGMRLGLAMAKAALAAIVQRFEVVVSPRTLNGTELD 480
            |.|:..|.........|.|::::.....|..|....|.|
  Fly   428 RGCIAARFAEQQLLVGLVALLRQHRYAPSAETSIPVEYD 466

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_572752.1 CYP6-like 67..493 CDD:410679 106/433 (24%)
Cyp6u1NP_610252.3 CYP6-like 69..479 CDD:410679 106/433 (24%)

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