DRSC/TRiP Functional Genomics Resources

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Protein Alignment Cyp28c1 and LOC100487054

DIOPT Version :10

Sequence 1:NP_572752.1 Gene:Cyp28c1 / 32138 FlyBaseID:FBgn0030339 Length:505 Species:Drosophila melanogaster
Sequence 2:XP_002937893.2 Gene:LOC100487054 / 100487054 XenbaseID:XB-GENE-29078603 Length:510 Species:Xenopus tropicalis


Alignment Length:489 Identity:127/489 - (25%)
Similarity:220/489 - (44%) Gaps:58/489 - (11%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SLLLGIATLLGAIYAFLVSNFGHWRRRGVTEPRALPLFGSFPNMIWPRQHFTMDMRDIYMHYRNT 68
            :||:.:.||| |.||  :..:..::|.|:..|..:|..|:|.........|.|:.      ::..
 Frog    13 TLLVLLLTLL-AYYA--IWPYRLFKRYGIPGPTPIPFIGTFLGNRKGLMEFDMEC------FKKY 68

  Fly    69 HSYVGCYLLRAPKLLVLEPRLVYEIYV-SAFSHFENNDASKMVDIAKDRLVALNPFVLEGEEWRH 132
            ....|.|..:.|.|.:::|.::..|.: ..:|:|.|..     |:.....:..:..|.:.|:|:.
 Frog    69 GKVWGIYEGQKPLLAIVDPVIIKSIMIKECYSNFTNRR-----DLGLTGPLKSSVLVSKDEQWKR 128

  Fly   133 QRAVFSTLLTNGRIRTTHAIMQRVCLDLCQFIAIKSAGGKDLDCIDLGLRFTGESLFDCVLGIQA 197
            .|.|.|...|:|:::....:|:.....|.:.|..|....:.||.    ....|....|.||....
 Frog   129 IRTVLSPTFTSGKLKQMFPLMKHYGELLVKNIHKKIDNKEPLDM----KHIFGSYSMDIVLSTSF 189

  Fly   198 RTFTD---NPL-PVV---RQNHEMSAENRGLAIAGAVHGLFPNLPR----WLRPKVFPRSHDRFY 251
            ....|   ||. |.|   |...:.|..|....||.....|.|.|.:    :|..|:.     .|:
 Frog   190 SVNVDSMNNPNDPFVTNARNLFKFSFFNPLFLIAILCPFLVPLLDKMNFCFLSLKIL-----NFF 249

  Fly   252 GQMISEALRLRRSK--HQERNDFINHLLEMQRE-------------LDLSEEDMASHAMTFMFDG 301
            ...:: :::.:|.|  |::|.|.:..:::.|..             .:||:.::.:.::.|:..|
 Frog   250 KDAVA-SIKKKRQKGTHEDRVDLLQLMVDAQSNEGESVPEEEKHGYKELSDTEILAQSLIFIMAG 313

  Fly   302 LDTTSNSIAHCLLLLGRNPDCQRRLYEELQLVNPGGYLPDLDALIDLPYLSACFNESLRIYPAGG 366
            .:|||.::......:..:||.||:|.||:..:.|....|..|||:.:.|:....||:||::|...
 Frog   314 YETTSTTLMFLAYNIATHPDVQRKLEEEIDALLPNKAPPTYDALMKMEYMDMVINETLRMFPPAI 378

  Fly   367 WASKTCTKEYELRGSHHSEPLKLRPGDHVMVPIYALHNDPDLYPEPDVFRPERFLDGGLKNCKQQ 431
            ...:.|.|..|:.|      :.:..|..::||::.||.:|:::|||:.|:||||.....|| :..
 Frog   379 RIDRVCKKTMEING------VTIPAGVVIVVPLFVLHLNPEIWPEPEEFQPERFSKENQKN-QDP 436

  Fly   432 GIFLGFGNGPRQCVGMRLGLAMAKAALAAIVQRF 465
            ..||.||.|||.|:|||..|...|..|..::|.|
 Frog   437 YNFLPFGVGPRNCIGMRFALVNMKLVLTILLQNF 470

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Cyp28c1NP_572752.1 CYP6-like 67..493 CDD:410679 111/426 (26%)
LOC100487054XP_002937893.2 cytochrome_P450 67..498 CDD:477761 111/426 (26%)

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