DRSC/TRiP Functional Genomics Resources

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Protein Alignment RPA3 and RPA3

DIOPT Version :10

Sequence 1:NP_572737.1 Gene:RPA3 / 32113 FlyBaseID:FBgn0288833 Length:112 Species:Drosophila melanogaster
Sequence 2:NP_002938.1 Gene:RPA3 / 6119 HGNCID:10291 Length:121 Species:Homo sapiens


Alignment Length:115 Identity:34/115 - (29%)
Similarity:50/115 - (43%) Gaps:3/115 - (2%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MDAFD-PRSIINGGMLKQFSGQTVSIMVRVESV--AGSTLLASSTDNHKLKINLPGELGAAEGAW 62
            :|..| |||.||.|||.||..:.|..:.|:|.:  .|...:.|..:.....|.|...|.......
Human     2 VDMMDLPRSRINAGMLAQFIDKPVCFVGRLEKIHPTGKMFILSDGEGKNGTIELMEPLDEEISGI 66

  Fly    63 VEVIGVPHGADTLRAKEVIEFGGENIDFDKDGYNGLSHLINNVKAFYRSG 112
            |||:|......|:.....::|..::..||...||....:|::...||..|
Human    67 VEVVGRVTAKATILCTSYVQFKEDSHPFDLGLYNEAVKIIHDFPQFYPLG 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
RPA3NP_572737.1 Rep_fac-A_3 1..109 CDD:462551 31/110 (28%)
RPA3NP_002938.1 Rep_fac-A_3 5..113 CDD:462551 32/110 (29%)

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