Protein Alignment RPA3 and ssb3

DIOPT Version :10

• Sequence 1: NP_572737.1
• Gene: RPA3 / 32113
• FlyBaseID: FBgn0288833
• Length: 112
• Species: Drosophila melanogaster
• Sequence 2: NP_588128.1
• Gene: ssb3 / 2538775
• PomBaseID: SPCC23B6.05C
• Length: 104
• Species: Schizosaccharomyces pombe
• Alignment Length: 108
• Identity: 25/108 - (23%)
• Similarity: 45/108 - (41%)
• Gaps: 10/108 - (9%)

  Fly     1 MDAFDPRSIINGGMLKQFSGQTVSIMVRVESVAGSTLLASSTDNHKLKINLPGELGAAEGAWVEV 65
            |:...||  :...||.:.||:||.|:.:...|.|.|....|..:..:.:.:...|  ....:.|.
pombe     1 MERPTPR--VTKDMLPECSGKTVRIVGKANQVEGETAKVDSNGSFDMHLTVDNTL--EPNHFYEF 61

  Fly    66 IGVPHGADTLRAKEVIEFGGENIDFDKDGYNGL---SHLINNV 105
            :.......:::....::||   .|.|.:.|..|   ||..|::
pombe    62 VVSVKPDSSVQLLTCVDFG---TDIDMEVYQKLVLFSHKYNSL 101

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
RPA3	NP_572737.1	Rep_fac-A_3	1..109	CDD:462551	25/108 (23%)
ssb3	NP_588128.1	Rep_fac-A_3	1..102	CDD:462551	25/108 (23%)