DRSC/TRiP Functional Genomics Resources

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Protein Alignment HOXB1 and Antp

DIOPT Version :10

Sequence 1:NP_002135.2 Gene:HOXB1 / 3211 HGNCID:5111 Length:301 Species:Homo sapiens
Sequence 2:NP_996167.1 Gene:Antp / 40835 FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster


Alignment Length:358 Identity:102/358 - (28%)
Similarity:128/358 - (35%) Gaps:97/358 - (27%)


- Green bases have known domain annotations that are detailed below.


Human     1 MDYNRMNSFLEYPLCN-RGPSAYSAHSAPTSFPPSSAQAVDSYASEGRYGGGLSSPAFQQ----- 59
            |.|.|...:...|..| :|......|.. .|.|.|.:..|.....:.:..|.|..|..||     
  Fly    55 MPYPRFPPYDRMPYYNGQGMDQQQQHQV-YSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQ 118

Human    60 ----NSGYPAQQPPSTLGVPFP------------SSAPSGYAPAACSPSYGPSQYYPLGQS---- 104
                .....|||.|..|....|            ...|..||......:.|.....|.|.|    
  Fly   119 PSQNQQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLV 183

Human   105 -EGDGGYF-----------HPSSYGAQLG----GLSD-------GYGAG------GAGPGPYPPQ 140
             :..|.:.           ||.   ||||    |:.|       .:..|      |..|...|||
  Fly   184 DQMSGHHMNAQMTLPHHMGHPQ---AQLGYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQ 245

Human   141 ---HPPYGNEQTASFAPAYADLLSEDKETPCPSEPNTPT----ARTFDWMKVKRNPPKTAKVSEP 198
               |...|..|.....|.        :.||....||:.:    :..:.||:     .:..|..|.
  Fly   246 GMMHQGQGPPQMHQGHPG--------QHTPPSQNPNSQSSGMPSPLYPWMR-----SQFGKCQER 297

Human   199 GLGSPSGLRTNFTTRQLTELEKEFHFNKYLSRARRVEIAATLELNETQVKIWFQNRRMKQKKRER 263
            ..|     |..:|..|..|||||||||:||:|.||:|||..|.|.|.|:||||||||||.||..:
  Fly   298 KRG-----RQTYTRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKENK 357

Human   264 EEGRVPPAPPGCPKEAAGDASDQSTCTSPEASP 296
            .:|.     ||     :|...|:.|   |..||
  Fly   358 TKGE-----PG-----SGGEGDEIT---PPNSP 377

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
HOXB1NP_002135.2 Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 20..77 15/65 (23%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 127..149 8/30 (27%)
Antp-type hexapeptide 179..184 1/4 (25%)
Homeodomain 207..260 CDD:459649 34/52 (65%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 254..301 15/43 (35%)
AntpNP_996167.1 KLF1_2_4_N <161..306 CDD:425360 33/165 (20%)
Homeodomain 298..354 CDD:459649 35/60 (58%)

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