DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG43155 and kcnc1a

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:XP_005168950.1 Gene:kcnc1a / 565419 ZFINID:ZDB-GENE-061220-10 Length:609 Species:Danio rerio


Alignment Length:455 Identity:93/455 - (20%)
Similarity:158/455 - (34%) Gaps:149/455 - (32%)


- Green bases have known domain annotations that are detailed below.


  Fly    15 DEASTELL-------EKLKHLDRRVDAAEGGGLAKGTAGGRRSTACWQS---------------- 56
            |:..||.|       |:|:...|         ||.|.:...:....||.                
Zfish   132 DDMDTEALGDPGDGDEELEMTKR---------LAVGDSPDTKGAGFWQRWQRRVWALFEDPYSSK 187

  Fly    57 -MKWKSALNHIGLLVSLSIYCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTILNNTEVH 120
             .:|.:..:...:|||::.:|                         ::|| |.| :.|:|.|.|:
Zfish   188 YARWVAFASLFFILVSITTFC-------------------------LETH-EAF-NPIINRTYVN 225

  Fly   121 NLDELLSFELAKYEAAVQQAAEGGLLIVADKDFPEPYERWSILQAVF------FSSTVLTTIGYG 179
            ..|....|.|...........||..::....:|        :::..|      |....|..|.:.
Zfish   226 TQDNTSRFHLETETVVYLTYIEGVCVVWFTFEF--------LMRVTFCPDKKKFIKNTLNIIDFV 282

  Fly   180 NIVPVTTGGRVFCICFALIGIPFT--------LTVIADWGRLFATAVSVFGKHMPTKPKFT-NFI 235
            .|:|       |.:...|.|:..:        |.|:.     |...:.:|        |.| :|:
Zfish   283 AILP-------FYLEVGLSGLSSSEAKDVLGFLRVVR-----FVRILRIF--------KLTRHFV 327

  Fly   236 G----------KTWFYAILAVGFLGVYLAAGAGLLLLWE-----------DDWTFFD----GFYF 275
            |          .|..:.:|.: ||.:.:...|.::...|           .:.|.|.    ||::
Zfish   328 GLRVLGHTLRASTNEFLLLII-FLALGVLIFATMIYYAERIGANPNDPRASEHTHFKNIPIGFWW 391

  Fly   276 CFITMTTIGFGDLVPKKPNYML---LCTLYILIGLAL-TSTIIELVRRQYATSWAKLQELSGPMA 336
            ..:||||:|:||:.|:..:.||   ||.|..::.:|: ...|:......|:.:.|| |:|.....
Zfish   392 AVVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNFGMYYSLAMAK-QKLPKKKN 455

  Fly   337 ETLRRLGETAGTGLDYTALQKVLTVSMPKWNSKKNEHSPDIAALEAITNAILKEVKEAQNNKPKV 401
            :.:.|..:........:|:           ||.  .|||.|:  |....|..:|:.|.....|||
Zfish   456 KHIPRAPQLGSANYCKSAM-----------NSP--HHSPQIS--EHCALAAQEEILEMNRADPKV 505

  Fly   402  401
            Zfish   506  505

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 13/84 (15%)
Ion_trans_2 <267..319 CDD:462301 19/59 (32%)
kcnc1aXP_005168950.1 BTB_KCNC1_3 6..122 CDD:349721
Ion_trans 189..445 CDD:459842 62/311 (20%)
Blue background indicates that the domain is not in the aligned region.

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