DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG43155 and Kcnc1

DIOPT Version :10

Sequence 1:NP_572720.2 Gene:CG43155 / 32092 FlyBaseID:FBgn0262685 Length:411 Species:Drosophila melanogaster
Sequence 2:NP_036988.1 Gene:Kcnc1 / 25327 RGDID:2955 Length:585 Species:Rattus norvegicus


Alignment Length:424 Identity:85/424 - (20%)
Similarity:146/424 - (34%) Gaps:166/424 - (39%)


- Green bases have known domain annotations that are detailed below.


  Fly    12 DSQDEASTELLEKLKHLDRRVDAAEG--GGLAKGTAGGRRSTACWQSMKWK-------------- 60
            |.:||     ||..|.| ...|:.:|  ||.      .||    ||...|.              
  Rat   144 DGEDE-----LEMTKRL-ALSDSPDGRPGGF------WRR----WQPRIWALFEDPYSSRYARYV 192

  Fly    61 SALNHIGLLVSLSIYCGVGGLIFRHLERPAEVERLSHLKDIVKTHRERFLHTILNNTEVHNLDEL 125
            :..:...:|||::.:|                         ::|| ||| :.|:|.||:.|:.. 
  Rat   193 AFASLFFILVSITTFC-------------------------LETH-ERF-NPIVNKTEIENVRN- 229

  Fly   126 LSFELAKYEAAVQQA----AEGGLLIVADKDFPEPYERWSILQAVF------FSSTVLTTIGYGN 180
             ..::..|..|..:|    .||..::....:|        :::.||      |....|..|.:..
  Rat   230 -GTQVRYYREAETEAFLTYIEGVCVVWFTFEF--------LMRVVFCPNKVEFIKNSLNIIDFVA 285

  Fly   181 IVPVTTGGRVFCICFALIGIPFT--------LTVIADWGRLFATAVSVFGKHMPTKPKFT-NFIG 236
            |:|       |.:...|.|:...        |.|:.     |...:.:|        |.| :|:|
  Rat   286 ILP-------FYLEVGLSGLSSKAAKDVLGFLRVVR-----FVRILRIF--------KLTRHFVG 330

  Fly   237 ----------KTWFYAILAVGFLGVYLAAGAGLLLLWE-----------DDWTFFD----GFYFC 276
                      .|..:.:|.: ||.:.:...|.::...|           .:.|.|.    ||::.
  Rat   331 LRVLGHTLRASTNEFLLLII-FLALGVLIFATMIYYAERIGAQPNDPSASEHTHFKNIPIGFWWA 394

  Fly   277 FITMTTIGFGDLVPKKPNYMLLCTLYILIGLALTSTIIELVRRQYATSWAKLQELSGPMAETLRR 341
            .:||||:|:||:.|:..:.||:..|..|.|:...:..:.::...:                    
  Rat   395 VVTMTTLGYGDMYPQTWSGMLVGALCALAGVLTIAMPVPVIVNNF-------------------- 439

  Fly   342 LGETAGTGLDYTALQKVLTVSMPKWNSKKNEHSP 375
                   |:.|:     |.::..|...||.:|.|
  Rat   440 -------GMYYS-----LAMAKQKLPKKKKKHIP 461

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG43155NP_572720.2 Ion_trans_2 143..214 CDD:462301 14/84 (17%)
Ion_trans_2 <267..319 CDD:462301 17/55 (31%)
Kcnc1NP_036988.1 BTB_KCNC1_3 6..122 CDD:349721
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 121..147 1/2 (50%)
Ion_trans 189..447 CDD:459842 64/347 (18%)
Selectivity filter. /evidence=ECO:0000250 400..405 2/4 (50%)
Blue background indicates that the domain is not in the aligned region.

Return to query results.
Submit another query.