DRSC/TRiP Functional Genomics Resources

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Protein Alignment Sk1 and F52C9.3

DIOPT Version :10

Sequence 1:NP_572717.1 Gene:Sk1 / 32089 FlyBaseID:FBgn0030300 Length:641 Species:Drosophila melanogaster
Sequence 2:NP_498138.2 Gene:F52C9.3 / 175732 WormBaseID:WBGene00018674 Length:439 Species:Caenorhabditis elegans


Alignment Length:338 Identity:79/338 - (23%)
Similarity:122/338 - (36%) Gaps:79/338 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly   152 FRSSNDYGVNLQTAEMWHHTIRKHKRGNGSSSPADCGKQLLILLNPKSGSGKGRELFQKQVAPLL 216
            :|...:.|:..:.|::      ..|.|..:.||....|::.:|:|.:..|....:.|.|...||.
 Worm    37 YRWDRNQGIRKEYAKI------AVKYGETTVSPETRPKRVFVLVNVEGNSRGCFDQFNKNALPLF 95

  Fly   217 TEAEVQYDLQITTHPQYAKEFVRTRRDLLTRYSGIV-VASGDGLFYEVLNGLMERMDWRRACREL 280
            ..|.||.|: :....|...|.:....|  |:.:.|: |..|||....|:.|:..    .|...:|
 Worm    96 HLAGVQVDV-VKADNQAQLEALAGAVD--TQEADILYVVGGDGTIGTVVTGIFR----NREKAQL 153

  Fly   281 PLGIIPCGSGN----GLAKSVAHHCNEPYEPKPILHATLTCMAG-KSTPMDVVRVELATRDKHFV 340
            |:|..|.|..|    .:..||..:.::      :.||..|.||. :.....|...||.|..    
 Worm   154 PVGFYPGGYDNLWLKRMLPSVFENSDD------VRHACETAMAVIEDQKKSVYAFELTTEG---- 208

  Fly   341 MYSFLSVGWGLIADIDIESERLRSIGAQRFTLWAIKRLIGLRSYKGRVSYLLGKGKKEP-PVEAA 404
              |.|:..:||   .|:.:...|.|...|...|.....      |.|.:|.....|:.| |:|..
 Worm   209 --STLAPEYGL---GDVSAGWFRQIEDTRKKFWYFSMA------KRRWAYFWEMLKRGPAPIECH 262

  Fly   405 RELPAESTAAGIRSSLP---------------------------------LN--AGEFHDLPEEE 434
            .|.  |.|.||.....|                                 :|  .||.|:| :..
 Worm   263 VEY--EETCAGCEKCRPKPIIEAPQWRWWHVLTGTPKYKNNDGQKDYTGIINEKCGEKHEL-DTH 324

  Fly   435 EGEAVLDGEQFAD 447
            ..|.:::.||.:|
 Worm   325 GAEFLIENEQMSD 337

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Sk1NP_572717.1 PLN02958 <189..622 CDD:215517 72/301 (24%)
F52C9.3NP_498138.2 LCB5 66..>266 CDD:441205 58/229 (25%)
DAGK_cat 69..>161 CDD:425868 27/98 (28%)

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