DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim8 and Timm8a1

DIOPT Version :10

Sequence 1:NP_572713.1 Gene:Tim8 / 32081 FlyBaseID:FBgn0027359 Length:88 Species:Drosophila melanogaster
Sequence 2:NP_445822.1 Gene:Timm8a1 / 84383 RGDID:621801 Length:97 Species:Rattus norvegicus


Alignment Length:72 Identity:34/72 - (47%)
Similarity:44/72 - (61%) Gaps:0/72 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSGNDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCIGKPSTKLDHATETCLSNCVDRFIDTSLL 71
            |:..|.:||.|:.:|.||.:....:|:..|:|||||:.||..|||...|.|..|||:||||||..
  Rat    12 LAAVDPQLQHFIEVETQKQRFQQLVHQMTELCWEKCMDKPGPKLDSRAEACFVNCVERFIDTSQF 76

  Fly    72 ITQRFAQ 78
            |..|..|
  Rat    77 ILNRLEQ 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim8NP_572713.1 zf-Tim10_DDP 16..78 CDD:460764 29/61 (48%)
Timm8a1NP_445822.1 zf-Tim10_DDP 21..83 CDD:460764 29/61 (48%)
Twin CX3C motif 43..66 12/22 (55%)

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