DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim8 and Timm8b

DIOPT Version :10

Sequence 1:NP_572713.1 Gene:Tim8 / 32081 FlyBaseID:FBgn0027359 Length:88 Species:Drosophila melanogaster
Sequence 2:NP_071986.1 Gene:Timm8b / 64372 RGDID:619840 Length:83 Species:Rattus norvegicus


Alignment Length:75 Identity:44/75 - (58%)
Similarity:58/75 - (77%) Gaps:0/75 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCIGKPSTKLDHATETCLSNCVDRFIDTSLLITQ 74
            ::.|||..:..|:||||..||:|.|.|:||:||:.||.::||..||.|||:||||||||:|.||.
  Rat     8 DEAELQRLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGSRLDSRTENCLSSCVDRFIDTTLAITG 72

  Fly    75 RFAQMLQKRG 84
            ||||::||.|
  Rat    73 RFAQIVQKGG 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim8NP_572713.1 zf-Tim10_DDP 16..78 CDD:460764 36/61 (59%)
Timm8bNP_071986.1 zf-Tim10_DDP 14..76 CDD:460764 36/61 (59%)
Twin CX3C motif 36..59 13/22 (59%)

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