DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim8 and Timm8a1

DIOPT Version :9

Sequence 1:NP_001285120.1 Gene:Tim8 / 32081 FlyBaseID:FBgn0027359 Length:88 Species:Drosophila melanogaster
Sequence 2:NP_038926.1 Gene:Timm8a1 / 30058 MGIID:1353433 Length:97 Species:Mus musculus


Alignment Length:72 Identity:34/72 - (47%)
Similarity:43/72 - (59%) Gaps:0/72 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LSGNDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCIGKPSTKLDHATETCLSNCVDRFIDTSLL 71
            |...|.:||.|:.:|.||.:....:|:..|:|||||:.||..|||...|.|..|||:||||||..
Mouse    12 LGAVDPQLQHFIEVETQKQRFQQLVHQMTELCWEKCMDKPGPKLDSRAEACFVNCVERFIDTSQF 76

  Fly    72 ITQRFAQ 78
            |..|..|
Mouse    77 ILNRLEQ 83

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim8NP_001285120.1 zf-Tim10_DDP 16..76 CDD:397210 28/59 (47%)
Timm8a1NP_038926.1 zf-Tim10_DDP 21..81 CDD:308549 28/59 (47%)
Twin CX3C motif 43..66 12/22 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0.928771 Normalized mean entropy S910
OMA 1 1.010 - - QHG52653
OrthoDB 1 1.010 - - D1593287at2759
OrthoFinder 1 1.000 - - FOG0001713
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101956
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1523
SonicParanoid 1 1.000 - - X1262
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
98.710

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