DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim8 and Timm8b

DIOPT Version :9

Sequence 1:NP_001285120.1 Gene:Tim8 / 32081 FlyBaseID:FBgn0027359 Length:88 Species:Drosophila melanogaster
Sequence 2:NP_038925.1 Gene:Timm8b / 30057 MGIID:1353424 Length:83 Species:Mus musculus


Alignment Length:75 Identity:44/75 - (58%)
Similarity:58/75 - (77%) Gaps:0/75 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 NDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCIGKPSTKLDHATETCLSNCVDRFIDTSLLITQ 74
            ::.|||..:..|:||||..||:|.|.|:||:||:.||.::||..||.|||:||||||||:|.||.
Mouse     8 DEAELQRLVAAEQQKAQFTAQVHHFMELCWDKCVEKPGSRLDSRTENCLSSCVDRFIDTTLAITG 72

  Fly    75 RFAQMLQKRG 84
            ||||::||.|
Mouse    73 RFAQIVQKGG 82

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim8NP_001285120.1 zf-Tim10_DDP 16..76 CDD:397210 34/59 (58%)
Timm8bNP_038925.1 zf-Tim10_DDP 16..74 CDD:397210 34/57 (60%)
Twin CX3C motif 36..59 13/22 (59%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167848267
Domainoid 1 1.000 87 1.000 Domainoid score I8054
eggNOG 1 0.900 - - E1_KOG3489
Hieranoid 00.000 Not matched by this tool.
Homologene 1 1.000 - - H8262
Inparanoid 1 1.050 100 1.000 Inparanoid score I4974
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52653
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0001713
OrthoInspector 1 1.000 - - oto92664
orthoMCL 1 0.900 - - OOG6_101956
Panther 1 1.100 - - LDO PTHR19338
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1523
SonicParanoid 1 1.000 - - X1262
SwiftOrtho 1 1.000 - -
TreeFam 1 0.960 - -
1514.790

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