DRSC/TRiP Functional Genomics Resources

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Protein Alignment Tim8 and Timm8a2

DIOPT Version :9

Sequence 1:NP_001285120.1 Gene:Tim8 / 32081 FlyBaseID:FBgn0027359 Length:88 Species:Drosophila melanogaster
Sequence 2:NP_001032833.1 Gene:Timm8a2 / 223262 MGIID:3615492 Length:97 Species:Mus musculus


Alignment Length:78 Identity:37/78 - (47%)
Similarity:47/78 - (60%) Gaps:0/78 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     6 NLSGNDKELQEFLLIEKQKAQVNAQIHEFNEICWEKCIGKPSTKLDHATETCLSNCVDRFIDTSL 70
            :|..:|.:||.|:..|.||.:|...||...|:|||||:.||..:||...|.||.|||:||||||.
Mouse    11 SLGSSDPQLQRFMEAEVQKQRVQLLIHHMTELCWEKCMDKPGPRLDGRAELCLVNCVERFIDTSQ 75

  Fly    71 LITQRFAQMLQKR 83
            .|..|..|..:.|
Mouse    76 FILNRLEQTQKAR 88

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Tim8NP_001285120.1 zf-Tim10_DDP 16..76 CDD:397210 30/59 (51%)
Timm8a2NP_001032833.1 zf-Tim10_DDP 21..83 CDD:367270 31/61 (51%)
Twin CX3C motif 43..66 12/22 (55%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_KOG3489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 1 1.010 - - QHG52653
OrthoDB 1 1.010 - - D1593287at2759
OrthoFinder 1 1.000 - - FOG0001713
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 1 0.900 - - OOG6_101956
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 1 1.030 - avgDist Average_Evolutionary_Distance R1523
SonicParanoid 1 1.000 - - X1262
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
87.760

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