DRSC/TRiP Functional Genomics Resources

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Protein Alignment GCS1 and R03E9.2

DIOPT Version :10

Sequence 1:NP_572707.4 Gene:GCS1 / 32073 FlyBaseID:FBgn0030289 Length:849 Species:Drosophila melanogaster
Sequence 2:NP_509135.3 Gene:R03E9.2 / 187540 WormBaseID:WBGene00019843 Length:619 Species:Caenorhabditis elegans


Alignment Length:268 Identity:51/268 - (19%)
Similarity:79/268 - (29%) Gaps:100/268 - (37%)


- Green bases have known domain annotations that are detailed below.


  Fly   280 SSKTNRLGVMSCLKLLHAEGGIKS----FWRGNGINVIKIAPESAI------------KFMCYDQ 328
            ||:.|||.... ..:.|..||.||    .||...|:...:...:||            ..:||..
 Worm    39 SSRFNRLFDRQ-KPIHHVLGGGKSADVLLWRNKKISASVLMGATAIWVLFEWINFHFLSLVCYAL 102

  Fly   329 LKRLIQKKKGNEEISTFERLCAGSAAGAI--SQSTIYPMEVMKTRLALRKT----------GQLD 381
            |..:|            .:....:|:|.:  |||.:       .||.|.|.          .:::
 Worm   103 LLGMI------------AQFVWSNASGFLNRSQSRV-------PRLVLPKDFFAEVGVAVGKEVN 148

  Fly   382 RGIIHFAHKMYTKEGIRCFYKGYLPNLIGIIPYAGIDLAIYETLKRTYVRYYETNSSEPGVLALL 446
            ||::...                             |||....||:..:          .|:.|.
 Worm   149 RGLLFLQ-----------------------------DLACKGNLKQFLM----------AVIGLW 174

  Fly   447 ACGTCSSTCGQLSSYPFALVRTRLQALSITRYSPQ----PDTMFGQFKYILQNEGVTGFYRGITP 507
            ......|.|..|:......|......:...||..:    .|:|..:|.         ..|:.:..
 Worm   175 VAAMVGSCCNFLTVLYIGFVGAHTMPVLYERYEDEVDGFMDSMIMKFH---------SHYKKLDT 230

  Fly   508 NFLKVIPA 515
            .||..||:
 Worm   231 GFLSRIPS 238

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GCS1NP_572707.4 Glyco_hydro_63N 104..>256 CDD:465316
Glyco_hydro_63 352..847 CDD:397353 32/180 (18%)
R03E9.2NP_509135.3 None
Blue background indicates that the domain is not in the aligned region.

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