DRSC - DRSC Integrative Ortholog Prediction Tool

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits

Protein Alignment CG34348 and Lpcat1

DIOPT Version :9

Sequence 1:	NP_001096954.1	Gene:	CG34348 / 32072	FlyBaseID:	FBgn0085377	Length:	323	Species:	Drosophila melanogaster
Sequence 2:	NP_001094205.1	Gene:	Lpcat1 / 361467	RGDID:	1311599	Length:	534	Species:	Rattus norvegicus

Alignment Length:	148	Identity:	31/148 - (20%)
Similarity:	55/148 - (37%)	Gaps:	54/148 - (36%)

- Green bases have known domain annotations that are detailed below.

  Fly    36 VTFL-LPLVFVALIYISFLVLFIY-------------------KLHRQVI---MRAVQGDRNFWR 77
            |.|: |.|..:.|::.:|::|..:                   .|.|:|:   ::|:.  |..|.
  Rat    46 VAFMTLTLFPIRLLFAAFMMLLAWPFALVASLGPPDKEPEQPLALWRKVVDFLLKAIM--RTMWF 108

  Fly    78 VGRKIVAAIWDAHARIYHGYEVIGLENVPQEGPALIV----YYHGAIPIDMYYLNSRMLLQRERL 138
            .|.             :|...|.|.:.:|.|...|.:    .|..|||:.| .::|.::....|
  Rat   109 AGG-------------FHRVAVKGRQALPTEAAILTLAPHSSYFDAIPVTM-TMSSIVMKAESR- 158

  Fly   139 IYTIGDRFLFKLPGWGTI 156
                      .:|.|||:
  Rat   159 ----------DIPIWGTL 166

Known Domains:

Indicated by green bases in alignment.

Gene	Sequence	Domain	Region	External ID	Identity
CG34348	NP_001096954.1	PlsC	47..271	CDD:223282	27/136 (20%)
CG34348	NP_001096954.1	LPLAT_MGAT-like	90..298	CDD:153249	17/71 (24%)
Lpcat1	NP_001094205.1	Disordered. /evidence=ECO:0000256\|SAM:MobiDB-lite	1..25
		PlsC	59..>242	CDD:223282	26/135 (19%)
		LPLAT_LPCAT1-like	103..314	CDD:153253	20/91 (22%)
		HXXXXD motif. /evidence=ECO:0000250\|UniProtKB:Q3TFD2	135..140		1/4 (25%)
		EFh	<350..412	CDD:298682
		EFh	384..446	CDD:298682
		EF-hand_7	421..479	CDD:290234
		EF-hand_8	432..483	CDD:290545
		Di-lysine motif. /evidence=ECO:0000250\|UniProtKB:Q3TFD2	531..534
Blue background indicates that the domain is not in the aligned region.

Information from Original Tools:

Tool	Simple Score	Weighted Score	Original Tool Information
Tool	Simple Score	Weighted Score	BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0204
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	1	0.900