DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Ir10a and Ir7c

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_572411.1 Gene:Ir7c / 31692 FlyBaseID:FBgn0029966 Length:625 Species:Drosophila melanogaster


Alignment Length:636 Identity:135/636 - (21%)
Similarity:232/636 - (36%) Gaps:191/636 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    58 FLL---RTEI--------PLSIVTYQENRYWMDDPFGRRNLVLVMSLDQLLTNRGAAAPIQKAST 111
            |||   |.|:        |.|.:|.:....|..|.. |....|.|.|:||      .:|.::...
  Fly    65 FLLEDDRVEMTETDTDPPPPSGLTGRPIAIWFLDSL-RSYFRLEMYLNQL------GSPYKRNGF 122

  Fly   112 FFYI---LADQDKDLSADEQLRLEGSCRQLWTQHKVYNRFFLTRDGV------WIYDPFKRRDSA 167
            |..|   |.||..     |.|::  ..|:|...:.:....||.|||.      :.|.|...:.| 
  Fly   123 FLVIYTGLEDQPM-----ESLKI--MFRRLLNMYVLNVNVFLQRDGTVHLYTYYPYGPHHCQSS- 179

  Fly   168 FGRLVRYYGSETLDKLLFRDMA----GYPLRIQMFRSVYT--------------RP----EFDKE 210
               |..||.:       |:|:|    |:.|...:|....|              ||    |.|.:
  Fly   180 ---LPVYYTA-------FQDLAAPANGFGLTKPLFPRKLTNMHGCEMVVATFEHRPYVIIEDDPK 234

  Fly   211 TGLLTRVTGVDFLVAQMLRERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDICLTGFF 275
            |.....:.|::.|:.:.|.||:|||:.|.:.:.|..||...:|::.|.:..::...:::....|.
  Fly   235 TPGGRSIHGIEGLIFRSLAERMNFTIKLVEQKDKNRGEILPDGNFTGILKMMVDGEVNLTFVCFM 299

  Fly   276 V----KDYLV--QQYMDFTVAVYDDELCIYVPKASRIPQSILPIFAV----GYDIW--------L 322
            .    .|.::  ..|..|.:.       :.||...    ||.|:..:    .|.||        .
  Fly   300 YSKARSDLMLPSTSYTSFPIV-------LVVPSGG----SISPMGRLTRPFRYIIWSCILVSLIF 353

  Fly   323 GFVLTAF--ACALIWLTLRVINLKLRIVSLGNQHIVGQALGIMVDTWVVWVRLNLSHLPASYAER 385
            ||||...  ..||..|...|:..:.|:..:|                 :|..| |..|.....:|
  Fly   354 GFVLICLLKITALPGLRNLVLGRRNRLPFMG-----------------MWASL-LGGLALYNPQR 400

  Fly   386 MF---------IGTLCLVSVIFGAIFESSLATVYIHPLYYKDI---NTMQELDE----------- 427
            .|         :.||.|.:...|.::           |..:|:   :.::.|.|           
  Fly   401 NFARYILVMWLLQTLILRAAYTGQLY-----------LLLQDVEMRSPIKSLSEVLAKDYEFRIL 454

  Fly   428 SGLKVVYKYSSMADDLFFSETSPLFASLNKKLSWNRD------LRADVIDEVARFRNKAGVSRYT 486
            ..|:.::| .||....|.:     ..||.:.|...||      ..|.:...|.:|..::|.::  
  Fly   455 PALRTIFK-DSMPTTNFHA-----VLSLEESLYRLRDEDDPGITVALLQPTVNQFDFRSGPNK-- 511

  Fly   487 SLILESSHFTLLRKIWVVPECPKYYTISYVMPRDSPWEDAVNALLLRFLNAGLIVKWIQDEKSWV 551
                        |.:.|:|:......:::.|...|.::..::.|::..:::|::.::   .|.::
  Fly   512 ------------RHLTVLPDPLMTAPLTFYMRPHSYFKRRIDRLIMAMMSSGIVARY---RKMYM 561

  Fly   552 D----IKMRSNILEADAESELVRVLTIGDLQLAFYVVIGGNLLAFLGFLAE 598
            |    :..|.| ||.       :.|:|..|...|....|..|:|.:.|:.|
  Fly   562 DRIKRVSKRRN-LEP-------KPLSIWRLSGIFVCCAGLYLVALIVFILE 604

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 17/79 (22%)
Ir7cNP_572411.1 Lig_chan-Glu_bd 225..287 CDD:214911 18/61 (30%)
Lig_chan 343..592 CDD:459656 57/308 (19%)

Return to query results.
Submit another query.