DRSC/TRiP Functional Genomics Resources

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Protein Alignment Ir10a and Ir52c

DIOPT Version :10

Sequence 1:NP_001096949.1 Gene:Ir10a / 32067 FlyBaseID:FBgn0083979 Length:600 Species:Drosophila melanogaster
Sequence 2:NP_725470.1 Gene:Ir52c / 246630 FlyBaseID:FBgn0050468 Length:599 Species:Drosophila melanogaster


Alignment Length:675 Identity:130/675 - (19%)
Similarity:249/675 - (36%) Gaps:176/675 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 VFLLFML---DLKTLNLT---------RLNGLL----VEPTRD----------LPQL-------E 38
            :.:||.|   ..:.|::|         ||.|||    ||.:.|          :|.|       .
  Fly     5 IIILFCLGNSSSQILDVTNNSHLDFDYRLFGLLQRLQVEKSYDTLLVYGEDCAIPSLFERLQVPA 69

  Fly    39 LWLRAGSDHQDAENPYVQWFLLRTEIPLSIVTYQENRYWMDDPFGRRNLVLVMSLDQLLTNRGAA 103
            :.:.:||.:.|       |......:.|| ..:|:.|   ::.:  |.|:.:.:..:|:..:|..
  Fly    70 VLVSSGSTNFD-------WNFSSLTLILS-CNFQDER---EENY--RTLMKLQTSRRLILLKGHI 121

  Fly   104 APIQKASTFFYILADQDKDLSADE---QLRLEGSCRQLWTQHKVYNRFFLTRDGVWIYDPFKRRD 165
            .|  ::...||...:|.......|   ||.:..|||....|:  |.:..|. ||..||       
  Fly   122 KP--ESVCDFYSKKEQHNVAMVKENFYQLEVVYSCRLFQDQN--YEKLNLF-DGKSIY------- 174

  Fly   166 SAFGRLVRYYGSETLDKLLFRDMAGYPLR-IQMFRSVYTRPEFDKETGLLTRVTGVDFLVAQMLR 229
                            |..||:|.|.|:| :.......|.|..|.:||.......|..|::|.::
  Fly   175 ----------------KDQFRNMHGAPIRTLSDKEPPRTIPYIDSKTGEEKFKGYVGMLISQFVK 223

  Fly   230 ERLNFTMLLQQPEKKYFGERSANGSYNGAIGSIIKDGLDIC---LTGFFVKDYL---VQQYMDFT 288
             ::|.||.:::                    .:|||..::.   :|.|...|.|   :.:.....
  Fly   224 -KVNATMQIRE--------------------DLIKDDEEVSFVDITNFTSNDILDIGICEARTLE 267

  Fly   289 VAVYD--------DELCIYVPKASRIPQSILPIFAVGYDIWLGFVLTAFACALIWLTLR---VIN 342
            ::.||        ...|...|....:|.|.:.:..|...|.:.|::....|:::.:.::   ..:
  Fly   268 MSNYDAISYPYLMSSYCFMAPLPDSLPFSDVYMAIVAPSILIMFLIIFCICSVLIIYIQERSYRS 332

  Fly   343 LKLRIVSLGNQHIVGQALGIMVDTWVVWVRLNLSH---LPASYAERMFIGTLCLVSVIFGAIFES 404
            |.:|.|.:.:                :.:|..|:.   .|..|..::   .|..:.|.|.::..:
  Fly   333 LTIRSVLMND----------------ICLRGFLAQPFPFPRQYNRKL---KLIFMLVCFSSLIST 378

  Fly   405 SLATVYIH-----PLYYKDINTMQELDESGLKVVYKYSSMADDLFFSETSPLFASLNKKLSWNRD 464
            ::.|.|:.     |.....:.:..::.:|      :| :||.:::..|   ...:||..|   .|
  Fly   379 TMYTAYLQAFLWGPPIEPRLTSFDDVKKS------RY-TMAINIYERE---FLEALNVSL---ED 430

  Fly   465 LRADVIDEVARFRNKAGVSRYTSLILESSHFTL-----LRKIWVVPECP-----KYYTISYVMPR 519
            :......:.::.|:... :.|...:.....||:     |.|..:...|.     ::..:|..:.|
  Fly   431 VEIYDYGKFSKLRSTFN-TNYLFPVTALQWFTINEEQKLFKYKIFYYCDAFCLNQFDILSIPLRR 494

  Fly   520 DSPWEDAVNALLLRFLNAGLIVKWIQDEKSWVDIKMRSNILEADAESELVR--VLTIGDLQLAFY 582
            ..|:.|.....:|.....||...||  ::|:.|: :|:|:......|.|:.  .:.:.:|...|.
  Fly   495 HLPYRDIFEEHMLLQKEFGLTKYWI--DQSYRDM-IRANLTTFKDFSPLLENDYIEVHNLYWVFT 556

  Fly   583 VVIGGNLLAFLGFLAEHFR----WK 603
            :...|..:....|:.|..|    |:
  Fly   557 MYFVGMGMGLCFFILEILRPLRYWR 581

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Ir10aNP_001096949.1 Periplasmic_Binding_Protein_Type_2 220..>294 CDD:473866 15/87 (17%)
Ir52cNP_725470.1 None

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