DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt3 and rpt3

DIOPT Version :10

Sequence 1:NP_572686.1 Gene:Rpt3 / 32047 FlyBaseID:FBgn0028686 Length:413 Species:Drosophila melanogaster
Sequence 2:NP_588437.1 Gene:rpt3 / 2539539 PomBaseID:SPCC576.10C Length:389 Species:Schizosaccharomyces pombe


Alignment Length:391 Identity:291/391 - (74%)
Similarity:340/391 - (86%) Gaps:5/391 - (1%)


- Green bases have known domain annotations that are detailed below.


  Fly    25 SSLDELDMEDLYVRYKKLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEEVKRIQSVPLVIGQFLE 89
            :|.:|:   |||.|:|.|::.||.:::||.:||::.::||:|.:.||||||||||||||||||||
pombe     2 NSTEEI---DLYNRWKALERQLEMLDLQEGFIKEDCKSLKRELIRAQEEVKRIQSVPLVIGQFLE 63

  Fly    90 AVDQNTGIVGSTTGSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEK 154
            |:||||.||||||||||.||||||:|||||||||||||.:|||||||:||||||||||||:|||:
pombe    64 AIDQNTAIVGSTTGSNYVVRILSTLDRELLKPSASVALQRHSNALVDILPPEADSSISMLRPDER 128

  Fly   155 PDVSYADIGGMDMQKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTT 219
            |||||||:||:|:||||:|||||||||..:||:|||||||||||:|||||.|||||.||||:.|.
pombe   129 PDVSYADVGGLDVQKQEVREAVELPLTQGDLYRQIGIDPPRGVLLYGPPGTGKTMLVKAVANSTA 193

  Fly   220 ASFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRIL 284
            |:||||||||||||||||||||||||||:|:||||||||||||||||||||||||||||||||||
pombe   194 ANFIRVVGSEFVQKYLGEGPRMVRDVFRMARENAPAIIFIDEIDAIATKRFDAQTGADREVQRIL 258

  Fly   285 LELLNQMDGFDQTTNVKVIMATNRADTLDPALLRPGRLDRKIEFP-LPDRRQKRLVFSTITSKMN 348
            :|||.|||||||..||||||||||||||||||||||||||||||| ..||||:||||.|||:||.
pombe   259 IELLTQMDGFDQGANVKVIMATNRADTLDPALLRPGRLDRKIEFPSYRDRRQRRLVFQTITAKML 323

  Fly   349 LSEDVDLEEFVARPDKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKNNIK-KDEQEHEFY 412
            ||.:|||:.|:.|||..|||.|.||.|:||:.|||::|.::|..|.|:.|...:| .|.::..||
pombe   324 LSPEVDLDTFIMRPDASSGAQIAAIMQDAGLLAVRKSRGVILQSDIEEAYARAVKPTDMEQFAFY 388

  Fly   413 K 413
            |
pombe   389 K 389

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt3NP_572686.1 PTZ00454 22..413 CDD:240423 289/389 (74%)
rpt3NP_588437.1 PTZ00454 2..389 CDD:240423 289/389 (74%)

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