Protein Alignment Rpt3 and rpt-2

DIOPT Version :9

• Sequence 1: NP_001285108.1
• Gene: Rpt3 / 32047
• FlyBaseID: FBgn0028686
• Length: 413
• Species: Drosophila melanogaster
• Sequence 2: NP_504558.1
• Gene: rpt-2 / 178988
• WormBaseID: WBGene00004502
• Length: 443
• Species: Caenorhabditis elegans
• Alignment Length: 377
• Identity: 189/377 - (50%)
• Similarity: 283/377 - (75%)
• Gaps: 6/377 - (1%)

  Fly    41 KLQKTLEFIEVQEEYIKDEQRNLKKEYLHAQEE---VKRIQSVPLVIGQFLEAVDQNTGIVGSTT 102
            |.::..:::.:::|:|::::| ||.:....:||   |..::..|:.:|...|.:|....||.:..
 Worm    67 KSERIKDYLLMEQEFIQNQER-LKPQEERQEEERAKVDELRGTPMAVGSLEEIIDDQHAIVSTNV 130

  Fly   103 GSNYYVRILSTIDRELLKPSASVALHKHSNALVDVLPPEADSSISMLQPDEKPDVSYADIGGMDM 167
            ||.:||.|:|.:|:|.|:|..||.|:..::|::.||..:.|..:|:::.::.|..:|||:||:|.
 Worm   131 GSEHYVNIMSFVDKEQLEPGCSVLLNHKNHAVIGVLSDDTDPMVSVMKLEKAPQETYADVGGLDQ 195

  Fly   168 QKQEIREAVELPLTHFELYKQIGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTASFIRVVGSEFVQ 232
            |.|||:|||||||||.|.|:::||.||:||::||.||.|||:||||||:.|:|:|:|:||||.:|
 Worm   196 QIQEIKEAVELPLTHPEYYEEMGIRPPKGVILYGCPGTGKTLLAKAVANQTSATFLRIVGSELIQ 260

  Fly   233 KYLGEGPRMVRDVFRLAKENAPAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQT 297
            ||||:||:|||::||:|:||||:|:|||||||:.|||:|:.:|.:||:||.:||||||:||||..
 Worm   261 KYLGDGPKMVRELFRVAEENAPSIVFIDEIDAVGTKRYDSNSGGEREIQRTMLELLNQLDGFDSR 325

  Fly   298 TNVKVIMATNRADTLDPALLRPGRLDRKIEFPLPDRRQKRLVFSTITSKMNLSEDVDLEEFVARP 362
            .:|||:|||||.::|||||:||||:||||||||||.:.||.:|...||:|.|.::|:||||:...
 Worm   326 GDVKVLMATNRIESLDPALIRPGRIDRKIEFPLPDEKTKRRIFQIHTSRMTLGKEVNLEEFITAK 390

  Fly   363 DKISGADINAICQEAGMHAVRENRYIVLAKDFEKGYKNNI--KKDEQEHEFY 412
            |::|||||.|:|.|||:.|:||.|..|..:||:|..:|.:  ||:....|.|
 Worm   391 DELSGADIKAMCTEAGLLALRERRMRVTMEDFQKSKENVLYRKKEGAPEELY 442

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt3	NP_001285108.1	PTZ00454	22..413	CDD:240423	189/377 (50%)
		AAA	197..330	CDD:278434	89/132 (67%)
rpt-2	NP_504558.1	PTZ00361	1..443	CDD:185575	189/377 (50%)
		Prot_ATP_ID_OB	112..>179	CDD:293059	23/66 (35%)
		AAA	225..358	CDD:278434	89/132 (67%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
Isobase	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	0	0.000	Not matched by this tool.
TreeFam	0	0.000	Not matched by this tool.
	2	1.920