DRSC/TRiP Functional Genomics Resources

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Protein Alignment C901 and crb

DIOPT Version :10

Sequence 1:NP_572673.1 Gene:C901 / 32032 FlyBaseID:FBgn0021742 Length:559 Species:Drosophila melanogaster
Sequence 2:NP_001247284.1 Gene:crb / 42896 FlyBaseID:FBgn0259685 Length:2253 Species:Drosophila melanogaster


Alignment Length:385 Identity:107/385 - (27%)
Similarity:157/385 - (40%) Gaps:111/385 - (28%)


- Green bases have known domain annotations that are detailed below.


  Fly    50 KSQKQRQNAHYVCDEK------------GDFKCL--PGWQGDLCQ---------VPMCRRGCDPM 91
            :|..||..:...|.::            |::.|:  .|:.|..||         :.:....|:..
  Fly   593 QSPTQRSASLNACPQENCLNGGTCLGYSGNYSCICASGYTGYNCQTSTGDGASALALTPINCNAT 657

  Fly    92 NGYCQRPG-------ECRCRIGYSGELCDK---CIPLPGCQHGGCTKPF-----ECICKPGWAGL 141
            ||.|...|       .|.|.:||||:.|:|   |.||      .|.:|.     :|:|.......
  Fly   658 NGKCLNGGTCSMNGTHCYCAVGYSGDRCEKAENCSPL------NCQEPMVCVQNQCLCPENKVCN 716

  Fly   142 FCTEPSCRTGCHSTRGYC-EAPG---ECRCRIGYAGRTC----SECATMPG-CQHGTCNK---PL 194
            .|....|:.|     |.| :.|.   ||:|..|:.||||    .||...|. |.:|.|..   ..
  Fly   717 QCATQPCQNG-----GECVDLPNGDYECKCTRGWTGRTCGNDVDECTLHPKICGNGICKNEKGSY 776

  Fly   195 ECLCLPGYTGLLCQTPICDPDC------------SKQHGYCRKPGECRCKVGWTGSQC----DKC 243
            :|.|.||:||:.|.:.:  .:|            :|.:.|     ||.|:.|:.|..|    |:|
  Fly   777 KCYCTPGFTGVHCDSDV--DECLSFPCLNGATCHNKINAY-----ECVCQPGYEGENCEVDIDEC 834

  Fly   244 FPYPGCANG----DCEAPWECNCHPGWGGMLCDEKLTYCVEHPDTCENGGKCTSLSREDGSYQCQ 304
            ...| |:||    |....:.|||.||..|.:||..:..||..|  |.|||:|..   :.|.::|.
  Fly   835 GSNP-CSNGSTCIDRINNFTCNCIPGMTGRICDIDIDDCVGDP--CLNGGQCID---QLGGFRCD 893

  Fly   305 CR-QGFLGKNCEIRDDFLLTSEAPPRITPPTPAELVLEL---------DGELDQNGQQDI 354
            |. .|:.|:|||:..|..|::       |.|.....|:.         :|...:|.:|||
  Fly   894 CSGTGYEGENCELNIDECLSN-------PCTNGAKCLDRVKDYFCDCHNGYKGKNCEQDI 946

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C901NP_572673.1 DSL <56..82 CDD:473190 7/48 (15%)
EGF_CA 280..315 CDD:238011 12/35 (34%)
crbNP_001247284.1 LamG 91..228 CDD:238058
EGF 269..299 CDD:394967
EGF_CA <311..341 CDD:238011
EGF_CA 386..423 CDD:238011
EGF_CA 425..460 CDD:238011
EGF 466..495 CDD:394967
EGF 605..633 CDD:394967 4/27 (15%)
EGF_CA 716..750 CDD:238011 12/38 (32%)
EGF_CA 753..789 CDD:238011 12/35 (34%)
EGF_CA 792..828 CDD:238011 8/42 (19%)
EGF_CA 830..865 CDD:238011 13/35 (37%)
EGF_CA 868..905 CDD:238011 14/41 (34%)
EGF_CA 907..943 CDD:238011 7/42 (17%)
EGF_CA 1009..1045 CDD:238011
EGF_CA 1047..1082 CDD:238011
Laminin_G_1 1155..1290 CDD:395008
EGF 1316..1346 CDD:394967
Laminin_G_1 1388..1550 CDD:395008
EGF_CA <1593..1622 CDD:238011
Laminin_G_2 1692..1828 CDD:460494
EGF_CA 1901..1937 CDD:238011
EGF_CA 1939..1974 CDD:238011
EGF_CA 2057..2094 CDD:238011
EGF_CA 2096..2133 CDD:238011
EGF_CA 2137..2175 CDD:238011
Blue background indicates that the domain is not in the aligned region.

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