DRSC/TRiP Functional Genomics Resources

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Protein Alignment C901 and jag1a

DIOPT Version :10

Sequence 1:NP_572673.1 Gene:C901 / 32032 FlyBaseID:FBgn0021742 Length:559 Species:Drosophila melanogaster
Sequence 2:XP_005168261.1 Gene:jag1a / 140421 ZFINID:ZDB-GENE-011128-2 Length:1253 Species:Danio rerio


Alignment Length:430 Identity:122/430 - (28%)
Similarity:168/430 - (39%) Gaps:146/430 - (33%)


- Green bases have known domain annotations that are detailed below.


  Fly    48 CEKSQKQRQN--AHYVCDEKGDFKCLPGWQGDLCQVPMCRRGCDPMNGYCQRPGECRCRIGYSGE 110
            |.|..:.|.:  .||.||..|:..||.||.|..|...:|::||...:|.|:.||.|||..|:.||
Zfish   197 CNKFCRPRDDFFGHYTCDHNGNKTCLEGWAGPECNTAICKQGCSIEHGSCKVPGNCRCLYGWQGE 261

  Fly   111 LCDKCIPLPGCQHGGCTKPFECICKPGWAGLFC--------TEPSCRTG------------CHST 155
            .||:|||.|||.||.|.:|::|:|...|.|..|        |...|..|            |...
Zfish   262 YCDQCIPHPGCVHGTCIEPWQCLCDTNWGGQLCDKDLNTCGTLQPCLNGGTCSNTGPDKYHCACP 326

  Fly   156 RGY----CEAPG---------------------ECRCRIGYAGRTCS----ECATMPGCQHG--- 188
            .||    ||...                     ||:|..|:.|.:|:    :|:..| |.|.   
Zfish   327 EGYSGQNCERADNACLSEPCLNGGLCVESSLGFECQCAAGWTGPSCNINEDDCSPNP-CNHSGVC 390

  Fly   189 -------TCNKPLE--------------------------------CLCLPGYTGLLCQTPICDP 214
                   .|..|::                                |.||||:||..|...:  .
Zfish   391 VDLVDGFKCICPVQWTGKTCLIDANECEESPCVNAHSCRNLIGGYFCECLPGWTGQNCDINV--N 453

  Fly   215 DCSKQHGYCRKPGECR---------CKVGWTGSQC----DKCFPYPGCANG----DCEAPWECNC 262
            ||   ||.|...|.|:         |..|:.|.:|    |:|...| |.||    |....::|.|
Zfish   454 DC---HGQCLNGGLCKDLVNGYRCVCAAGFAGDRCERDVDECASRP-CLNGGRCQDTLNGFQCLC 514

  Fly   263 HPGWGGMLCDEKLTYCVEHPDTCENGGKCTSLSREDGSYQCQCRQGFLGKNC-EIRDDFLLTSEA 326
            .||:.|..|...|.||...|  |:||.:|.||:.:   |.|:|.:.:.|||| :::|..|:    
Zfish   515 PPGFSGATCQLDLDYCESGP--CQNGAQCFSLASD---YYCKCPEDYEGKNCSQLKDHCLI---- 570

  Fly   327 PPRITPPTPAELVLELDGELDQNGQQDIGAGVPDDSEPGG 366
                   ||.:::            ......|..:|.|||
Zfish   571 -------TPCQVI------------DSCTVAVVSNSTPGG 591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
C901NP_572673.1 DSL <56..82 CDD:473190 11/27 (41%)
EGF_CA 280..315 CDD:238011 14/35 (40%)
jag1aXP_005168261.1 MNNL 29..186 CDD:462222
DSL 168..230 CDD:128366 13/32 (41%)
EGF_CA 297..335 CDD:238011 6/37 (16%)
EGF 341..370 CDD:394967 4/28 (14%)
EGF_CA 375..410 CDD:238011 6/35 (17%)
EGF_CA 413..448 CDD:238011 7/34 (21%)
EGF_CA 451..486 CDD:238011 10/39 (26%)
EGF_CA 488..524 CDD:238011 12/36 (33%)
EGF_CA 526..561 CDD:238011 15/39 (38%)
EGF_CA 632..668 CDD:238011
EGF_CA 670..705 CDD:238011
EGF 712..742 CDD:394967
EGF 751..781 CDD:394967
EGF_CA 787..820 CDD:238011
EGF_CA 823..859 CDD:238011
VWC_out 866..934 CDD:214565
Blue background indicates that the domain is not in the aligned region.

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