DRSC/TRiP Functional Genomics Resources

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Protein Alignment: HOXA4 and Antp

Sequence 1:NP_002132.3 Gene:HOXA4 HGNCID:5105 Length:320 Species:Homo sapiens
Sequence 2:NP_996167.1 Gene:Antp FlyBaseID:FBgn0260642 Length:378 Species:Drosophila melanogaster

Alignment Length:384 Identity:117/385 (30%)
Similarity:135/385 (35%) Gaps:163/385 (42%)


Human    15 PKFPPFEEYAQHSGSG------------------------------GADGGPGGGPGYQQPP--- 46
            |:|||::....::|.|                              |..|.|......||.|   
  Fly    58 PRFPPYDRMPYYNGQGMDQQQQHQVYSRPDSPSSQVGGVMPQAQTNGQLGVPQQQQQQQQQPSQN 122

Human    47 --------APP---------TQHL--PLQQPQLP----------HAGG----------------- 65
                    ||.         ||.:  |.||.|.|          ..||                 
  Fly   123 QQQQQAQQAPQQLQQQLPQVTQQVTHPQQQQQQPVVYASCKLQAAVGGLGMVPEGGSPPLVDQMS 187

Human    66 GREPTASYYAPRTAREPAYPAAALYPAHGAADTAYP--------------YGYRGGASP-GRPPQ 115
            |....|....|   ....:|.|.|    |..|...|              |..:.|..| |.|||
  Fly   188 GHHMNAQMTLP---HHMGHPQAQL----GYTDVGVPDVTEVHQNHHNMGMYQQQSGVPPVGAPPQ 245

Human   116 PEQPPAQAKGPAHGLHASHVLQPQLPPPLQPRAVPPAAPRRCEAAPATPGVPAGGSAPACPLLLA 180
            ...  .|.:||.. :|..|..| ..||...|.:             .:.|:|             
  Fly   246 GMM--HQGQGPPQ-MHQGHPGQ-HTPPSQNPNS-------------QSSGMP------------- 280

Human   181 DKSPLGLKGKEPVVYPWMKKIHVSAVNPSYNG--GEPKRSRTAYTRQQVLELEKEFHFNRYLTRR 243
              |||         ||||:         |..|  .|.||.|..|||.|.||||||||||||||||
  Fly   281 --SPL---------YPWMR---------SQFGKCQERKRGRQTYTRYQTLELEKEFHFNRYLTRR 325

Human   244 RRIEIAHTLCLSERQVKIWFQNRRMKWKKDHKLPNTKMRSSNSASASAG----PPGKAQ 298
            |||||||.|||:|||:|||||||||||||::|   ||   ....|...|    ||...|
  Fly   326 RRIEIAHALCLTERQIKIWFQNRRMKWKKENK---TK---GEPGSGGEGDEITPPNSPQ 378

Known Domains:


GeneSequenceDomainRegion External IDIdentity
HOXA4NP_002132.3 Antp-type hexapeptide 194..199 4/5 (80%)
Homeobox 218..271 CDD:278475 45/53 (85%)
AntpNP_996167.1 Homeobox 301..353 CDD:278475 45/52 (87%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E2759_KOG0489
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
10.900

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