DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg8a and ATG8B

DIOPT Version :10

Sequence 1:NP_727447.1 Gene:Atg8a / 32001 FlyBaseID:FBgn0052672 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_192371.1 Gene:ATG8B / 825794 AraportID:AT4G04620 Length:122 Species:Arabidopsis thaliana


Alignment Length:115 Identity:64/115 - (55%)
Similarity:86/115 - (74%) Gaps:0/115 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 KFQYKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRK 66
            |..:|..:..|.|.||..:||.|||:|||||||||.::.:.|:||||||||:|||:|||.:::||
plant     3 KNSFKLSNPLEMRMAESTRIRAKYPERVPVIVEKAGQSDVPDIDKKKYLVPADLTIGQFVYVVRK 67

  Fly    67 RIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
            ||.|..|.|:|.||.|.:|||:|.|.::|:||.:||.|||:.||.||.:|
plant    68 RIKLGAEKAIFVFVKNTLPPTAALMSAIYEEHKDEDGFLYMTYSGENTFG 117

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8aNP_727447.1 Ubl_ATG8_GABARAP 2..116 CDD:340752 63/113 (56%)
ATG8BNP_192371.1 Ubl_ATG8 12..114 CDD:340545 59/101 (58%)

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