DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Atg8a and ATG8H

DIOPT Version :10

Sequence 1:NP_727447.1 Gene:Atg8a / 32001 FlyBaseID:FBgn0052672 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_566283.1 Gene:ATG8H / 819816 AraportID:AT3G06420 Length:119 Species:Arabidopsis thaliana


Alignment Length:112 Identity:53/112 - (47%)
Similarity:75/112 - (66%) Gaps:0/112 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 YKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIH 69
            :|::.:.::|..|.:.|..|||||:|||:||...|.:.|::|.|||||.|:|||.|..::.||:.
plant     8 FKDQFSSDERLKESNNIIAKYPDRIPVIIEKYSNADLPDMEKNKYLVPRDMTVGHFIHMLSKRMQ 72

  Fly    70 LRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
            |.|..|||.||:|.:|.|::.|.|||....|||.|||:.||.|..:|
plant    73 LDPSKALFVFVHNTLPQTASRMDSLYNTFKEEDGFLYMCYSTEKTFG 119

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8aNP_727447.1 Ubl_ATG8_GABARAP 2..116 CDD:340752 52/110 (47%)
ATG8HNP_566283.1 ATG8 16..119 CDD:281049 51/102 (50%)

Return to query results.
Submit another query.