DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg8a and ATG8D

DIOPT Version :10

Sequence 1:NP_727447.1 Gene:Atg8a / 32001 FlyBaseID:FBgn0052672 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_001154497.1 Gene:ATG8D / 815112 AraportID:AT2G05630 Length:164 Species:Arabidopsis thaliana


Alignment Length:108 Identity:63/108 - (58%)
Similarity:89/108 - (82%) Gaps:0/108 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 AFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIRKRIHLRPED 74
            :.:||:||..:||.|||||:|||||:|.|:.:.|:|:||||||:|||||||.:::||||.|.||.
plant    55 SLKKRQAEAARIREKYPDRIPVIVERAEKSDVPDIDRKKYLVPADLTVGQFVYVVRKRIKLSPEK 119

  Fly    75 ALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYGM 117
            |:|.||.|::|||:|.|.::|:||.:||.|||::||.||.:|:
plant   120 AIFIFVKNILPPTAAIMSAIYEEHKDEDGFLYMSYSGENTFGI 162

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8aNP_727447.1 Ubl_ATG8_GABARAP 2..116 CDD:340752 62/105 (59%)
ATG8DNP_001154497.1 Ubl_ATG8 56..158 CDD:340545 60/101 (59%)

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