DRSC/TRiP Functional Genomics Resources

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Protein Alignment Atg8a and Gabarapl1

DIOPT Version :10

Sequence 1:NP_727447.1 Gene:Atg8a / 32001 FlyBaseID:FBgn0052672 Length:121 Species:Drosophila melanogaster
Sequence 2:NP_065615.1 Gene:Gabarapl1 / 57436 MGIID:1914980 Length:117 Species:Mus musculus


Alignment Length:116 Identity:99/116 - (85%)
Similarity:110/116 - (94%) Gaps:0/116 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MKFQYKEEHAFEKRRAEGDKIRRKYPDRVPVIVEKAPKARIGDLDKKKYLVPSDLTVGQFYFLIR 65
            |||||||:|.||.|:.||:|||:|||||||||||||||||:.||||:||||||||||||||||||
Mouse     1 MKFQYKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAPKARVPDLDKRKYLVPSDLTVGQFYFLIR 65

  Fly    66 KRIHLRPEDALFFFVNNVIPPTSATMGSLYQEHHEEDYFLYIAYSDENVYG 116
            |||||||||||||||||.|||||||||.||:::||||||||:|||||:|||
Mouse    66 KRIHLRPEDALFFFVNNTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Atg8aNP_727447.1 Ubl_ATG8_GABARAP 2..116 CDD:340752 96/113 (85%)
Gabarapl1NP_065615.1 Ubl_ATG8_GABARAP_like 5..111 CDD:340544 89/105 (85%)

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