DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG15306 and Sry

DIOPT Version :10

Sequence 1:NP_572618.1 Gene:CG15306 / 31961 FlyBaseID:FBgn0030191 Length:357 Species:Drosophila melanogaster
Sequence 2:NP_035694.1 Gene:Sry / 21674 MGIID:98660 Length:395 Species:Mus musculus


Alignment Length:166 Identity:42/166 - (25%)
Similarity:66/166 - (39%) Gaps:10/166 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly   188 DEDSQHTDKKDEDSRDQGSQYEDSPGMDSQYKDCRDQDSQYEDSHGKDSQYKD--CRDQGSQYED 250
            |....|.:::..|...|..|:.     |.|.:..:.|..|:.|.|.:..|:.|  ...|..|:.|
Mouse   204 DHHHHHQEQQFHDHHQQQQQFH-----DHQQQQQQQQQQQFHDHHQQKQQFHDHHHHQQQQQFHD 263

  Fly   251 SHGMDSQYEDSRDQDSQYEDSPGMDSQYKDSRDQDSQYEDSHGKD---SQYKDCRDQGSQYEDSH 312
            ......|:.|.:.|..|:.|.|....|:.|...|..|:.|.|.:.   .|:.|...|..|:.|.|
Mouse   264 HQQQQQQFHDHQQQQHQFHDHPQQKQQFHDHPQQQQQFHDHHHQQQQKQQFHDHHQQKQQFHDHH 328

  Fly   313 GMDSQYKDSRDQGCQYEDSHGKDSEDEDSQYEDSQD 348
            ....|:.|...|..|:.|.|.:..:.:..|.:...|
Mouse   329 QQKQQFHDHHQQQQQFHDHHQQQQQQQQQQQQQFHD 364

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG15306NP_572618.1 CH 18..124 CDD:425596
MSCRAMM_ClfA <185..346 CDD:468110 41/162 (25%)
SryNP_035694.1 Sufficient for interaction with KPNB1. /evidence=ECO:0000250|UniProtKB:Q05066 4..81
HMG-box_SoxA_SoxB_SoxG 4..79 CDD:438837
Required for nuclear localization. /evidence=ECO:0000250|UniProtKB:Q05066 6..22
Sufficient for interaction with EP300. /evidence=ECO:0000250|UniProtKB:Q05066 52..84
Required for nuclear localization. /evidence=ECO:0000250|UniProtKB:Q05066 75..81
Necessary for interaction with ZNF208 isoform KRAB-O. /evidence=ECO:0000269|PubMed:15469996 92..144
Necessary for interaction with SLC9A3R2 and nuclear accumulation of SLC9A3R2. /evidence=ECO:0000269|PubMed:16166090 94..138
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 142..361 41/161 (25%)
Blue background indicates that the domain is not in the aligned region.

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