DRSC/TRiP Functional Genomics Resources

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Protein Alignment Gip and ygbM

DIOPT Version :9

Sequence 1:NP_511106.1 Gene:Gip / 31960 FlyBaseID:FBgn0011770 Length:264 Species:Drosophila melanogaster
Sequence 2:NP_417219.1 Gene:ygbM / 947207 ECOCYCID:G7420 Length:258 Species:Escherichia coli


Alignment Length:256 Identity:87/256 - (33%)
Similarity:144/256 - (56%) Gaps:8/256 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 KFAANLNFLFTERATSIAERIRLAHQNGFRAVEIPYPEG-ETSDVVSAVKETGVVVSLVNLAFDK 67
            :|||||:.:|||  ....||...|.:.||.|||..:|.. .|..:...:::..:.::|.|.|  .
E. coli     3 RFAANLSMMFTE--VPFIERFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLALFNTA--P 63

  Fly    68 SD-DQLRFGSTSVPGSEKLFRSQLDATIDFARQVNCGKIHLTAGLFKGGQESD-YTKTYTANLKI 130
            .| :...:|.:::||.|....:.:|..:::|..:||.::|:.||:...|:::: |...:..|::.
E. coli    64 GDINAGEWGLSALPGREHEAHADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRY 128

  Fly   131 AADSLRASKMIGVIEPINKYAVPGYYMNSYSKAAGILADVAADNIQLLADLYHLQHLHGNVSKTL 195
            |||.........::|.::....|.|..:|..:|..|:.:||.||:.:..|.:|.|.:.||::..:
E. coli   129 AADRFAPHGKRILVEALSPGVKPHYLFSSQYQALAIVEEVARDNVFIQLDTFHAQKVDGNLTHLI 193

  Fly   196 EEYKALIGHFQIAQVPHRHEPDVSGELDYGFVFKALQEFGYDGWIGCEYKPKTTTVEGLGW 256
            .:|.....|.|||.:|.||||| .||::|.::|:...|.||.|||||||||:..|.|||||
E. coli   194 RDYAGKYAHVQIAGLPDRHEPD-DGEINYPWLFRLFDEVGYQGWIGCEYKPRGLTEEGLGW 253

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
GipNP_511106.1 OH-pyruv-isom 4..256 CDD:163190 85/254 (33%)
AP_endonuc_2 24..222 CDD:279585 56/200 (28%)
ygbMNP_417219.1 PRK09989 1..258 CDD:182185 87/256 (34%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 1 1.000 93 1.000 Domainoid score I391
eggNOG 1 0.900 - - E1_COG3622
Hieranoid 1 1.000 - -
Inparanoid 1 1.050 160 1.000 Inparanoid score I203
OMA 00.000 Not matched by this tool.
OrthoFinder 1 1.000 - - FOG0005694
OrthoInspector 1 1.000 - - otm51332
orthoMCL 1 0.900 - - OOG6_106707
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X4089
SwiftOrtho 1 1.000 - -
109.760

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