DRSC/TRiP Functional Genomics Resources

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Protein Alignment ATPsyndelta and atp5f1d

DIOPT Version :10

Sequence 1:NP_572610.1 Gene:ATPsyndelta / 31950 FlyBaseID:FBgn0028342 Length:157 Species:Drosophila melanogaster
Sequence 2:NP_956262.1 Gene:atp5f1d / 335709 ZFINID:ZDB-GENE-030131-7649 Length:159 Species:Danio rerio


Alignment Length:156 Identity:82/156 - (52%)
Similarity:106/156 - (67%) Gaps:5/156 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 ARLLAARGA-RLAQNRSYSD----EMKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTL 66
            ||.|..|.| .|...|||:|    :|..|||:..:.|:..|.|:|||||:.:|:||||..|||||
Zfish     4 ARFLLRRAAPALRHARSYADAPSAQMSFTFASPTEVFFKEASVKQIDVPTLTGAFGILPAHVPTL 68

  Fly    67 AVLKPGVVQVVENDGKTLKFFVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLS 131
            .||:||||.|..:||.:.|:||||||||||.|||||:|||||..:|.:|...|:..|.|.||:|.
Zfish    69 QVLRPGVVTVFNDDGSSKKYFVSSGSVTVNADSSVQLLAEEAFPLESLDVAAAKANLEKAQSELV 133

  Fly   132 SAGDDKAKAQAAIAVEVAEALVKAAE 157
            ||.|:..:|:..|::|..||:|||.|
Zfish   134 SASDEATRAEVLISIEANEAIVKALE 159

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ATPsyndeltaNP_572610.1 F1-ATPase_delta 27..141 CDD:213395 63/113 (56%)
atp5f1dNP_956262.1 F1-ATPase_delta 29..153 CDD:213395 66/123 (54%)

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