DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum4 and fum1

DIOPT Version :10

Sequence 1:NP_723527.1 Gene:Fum4 / 318995 FlyBaseID:FBgn0051874 Length:484 Species:Drosophila melanogaster
Sequence 2:NP_588397.3 Gene:fum1 / 2539345 PomBaseID:SPCC18.18C Length:520 Species:Schizosaccharomyces pombe


Alignment Length:459 Identity:241/459 - (52%)
Similarity:328/459 - (71%) Gaps:3/459 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    24 RVEYDSMGAVHIPLDRMFGPQTMRSLMKFPIGGVEERMPRPLIKALGIVKKSAAETNKIHCLEEH 88
            |.|.|:.|.:.:|.::.:|.||.|||..|.|||.:||:|.||::|.|::|::||..|:...|:..
pombe    59 RQESDTFGPIQVPAEKYWGAQTQRSLQNFRIGGEKERLPLPLVRAFGVLKRAAASVNREFGLDPK 123

  Fly    89 LCDAISKACDDVISGKLYDEEHFPLVIWQDGSGEHTNMNVNEVICNRAIEILGGQMGSKEPVDPN 153
            |.|||.:|..:||.|:|  :::||||::|.|||..:|||.||||.|||||||||.:|||:||.||
pombe   124 LADAIEQAAQEVIDGRL--DDNFPLVVFQTGSGTQSNMNSNEVIANRAIEILGGTLGSKKPVHPN 186

  Fly   154 EHVNMAQSSHDTFSTAVRIAVAMQLQETLYPSLRTFIDLLGKKSNDWMDLIKIGRTHLMDAVPLS 218
            :||||:|||:|||.|.:.||..:|:...|.|:::.....|..|..::.::|||||||:.||.|||
pombe   187 DHVNMSQSSNDTFPTVMHIASVLQIHTHLLPAMKHLHRALKGKEEEFKNIIKIGRTHMQDATPLS 251

  Fly   219 LGQEFSGYQQQLVNGRTRLDCAMCRLYQLPMGGTSVGTKVDTKAEYSAQCIKRIAELTFLPFVES 283
            ||||||||..|:..|..|::.|:.||..|..|||:|||.::|...:..:..:::::||.:.|..:
pombe   252 LGQEFSGYVTQVGYGIERINNALPRLCLLAQGGTAVGTGLNTFEGFDVKVAEKVSKLTNIEFKTA 316

  Fly   284 PNFFESISACDCLVELHGELNTIAASVMKIANDIRFLGSGPRCGFGELHLPENEPGSSIMPGKVN 348
            ||.||:::|.|.:||:.|.||.||.|:||||||||.||||||||.|||.||.|||||||||||||
pombe   317 PNKFEALAAHDAIVEMSGALNVIACSLMKIANDIRQLGSGPRCGLGELILPANEPGSSIMPGKVN 381

  Fly   349 PTQCEAMSMICAQVMGNHVAVSMGGSSGHFQLNTFMPMIASNVLRSITLLGDGMKSFCTNCLEGI 413
            ||||||::|:||||||||..:::.|:|||.:||.|.|::|.|:|.||.||||..:||..:|:.||
pombe   382 PTQCEALTMVCAQVMGNHATITVAGASGHCELNVFKPLLAKNILSSIRLLGDACESFTDHCVVGI 446

  Fly   414 EPNRSKIGSIVKESLMLVTALSPHIGYERSAAIAKAAHHNGTTLEQEAILDGI-QREDFREWVQP 477
            |||...|...:::||||||||:|||||:..|.|||.|..|.:||:.|.:..|. ..|.|.|||:|
pombe   447 EPNYEGIARHLRDSLMLVTALNPHIGYDNCAKIAKTALKNKSTLKHEFVTLGFGTPEQFDEWVRP 511

  Fly   478 SKML 481
            ..|:
pombe   512 ELMI 515

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum4NP_723527.1 Fumarase_classII 24..480 CDD:176465 240/456 (53%)
fum1NP_588397.3 FumC 57..515 CDD:439884 240/457 (53%)

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