DRSC/TRiP Functional Genomics Resources

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Protein Alignment Fum4 and fh

DIOPT Version :10

Sequence 1:NP_723527.1 Gene:Fum4 / 318995 FlyBaseID:FBgn0051874 Length:484 Species:Drosophila melanogaster
Sequence 2:XP_002935862.3 Gene:fh / 100491219 XenbaseID:XB-GENE-944116 Length:497 Species:Xenopus tropicalis


Alignment Length:476 Identity:269/476 - (56%)
Similarity:356/476 - (74%) Gaps:4/476 - (0%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 SLMYKLARLIVPDTRVEYDSMGAVHIPLDRMFGPQTMRSLMKFPIGGVEERMPRPLIKALGIVKK 74
            ||..|..|: ....|:|.|:.|.:.:|.|:.:|.||:||.|.|.||||.||||.|:|:|.||:|:
 Frog    25 SLTVKQGRM-ASSYRIESDTFGELQVPNDKYYGAQTVRSTMNFKIGGVTERMPVPVIRAFGILKR 88

  Fly    75 SAAETNKIHCLEEHLCDAISKACDDVISGKLYDEEHFPLVIWQDGSGEHTNMNVNEVICNRAIEI 139
            :|||.|:.:.|:.::.:.|.||.|:|.||||  ::|||||:||.|||..|||||||||.|||||:
 Frog    89 AAAEVNQDYGLDPNIANFIIKAADEVSSGKL--DDHFPLVVWQTGSGTQTNMNVNEVISNRAIEM 151

  Fly   140 LGGQMGSKEPVDPNEHVNMAQSSHDTFSTAVRIAVAMQLQETLYPSLRTFIDLLGKKSNDWMDLI 204
            :||::|||:||.||:|||.:|||:|||.||:.||...::.|.|.|.|:...|.|.:||.::.::|
 Frog   152 MGGKLGSKDPVHPNDHVNKSQSSNDTFPTAMHIAAVKEVHEVLLPGLQKLHDALEEKSKEFENII 216

  Fly   205 KIGRTHLMDAVPLSLGQEFSGYQQQLVNGRTRLDCAMCRLYQLPMGGTSVGTKVDTKAEYSAQCI 269
            ||||||..|||||:|||||.||.||:....:|:..|:.|:|:|..|||:|||.::|:..::.:..
 Frog   217 KIGRTHTQDAVPLTLGQEFGGYVQQIKYSVSRIKAALPRVYELAAGGTAVGTGLNTRIGFAEKVA 281

  Fly   270 KRIAELTFLPFVESPNFFESISACDCLVELHGELNTIAASVMKIANDIRFLGSGPRCGFGELHLP 334
            .::||||.|||:.:||.|||::|.|.||||.|.|||:|.|:|||||||||||||||.|.|||.||
 Frog   282 AKVAELTGLPFITAPNKFESLAAHDALVELSGALNTLACSLMKIANDIRFLGSGPRSGLGELILP 346

  Fly   335 ENEPGSSIMPGKVNPTQCEAMSMICAQVMGNHVAVSMGGSSGHFQLNTFMPMIASNVLRSITLLG 399
            ||||||||||||||||||||::|:.|||||||||:::|.|:|||:||.|.|:|..|||:||.|||
 Frog   347 ENEPGSSIMPGKVNPTQCEAVTMVAAQVMGNHVAITIGCSNGHFELNVFKPVIIKNVLQSIRLLG 411

  Fly   400 DGMKSFCTNCLEGIEPNRSKIGSIVKESLMLVTALSPHIGYERSAAIAKAAHHNGTTLEQEAILD 464
            |...||..||:.|::.|..:|..::.|||||||||:|||||:::|.|||.||..||||::.||..
 Frog   412 DAAVSFTDNCIVGVQANTERINKLMSESLMLVTALNPHIGYDKAAKIAKTAHKEGTTLKETAIKL 476

  Fly   465 GIQRED-FREWVQPSKMLGPE 484
            |....| |.:||:|..||||:
 Frog   477 GFLTSDQFDQWVKPEDMLGPK 497

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Fum4NP_723527.1 Fumarase_classII 24..480 CDD:176465 261/456 (57%)
fhXP_002935862.3 FumC 34..495 CDD:439884 262/462 (57%)

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