DRSC/TRiP Functional Genomics Resources

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Protein Alignment: Acp24A4 and Aplp1

Sequence 1:NP_001036330.1 Gene:Acp24A4 FlyBaseID:FBgn0051779 Length:78 Species:Drosophila melanogaster
Sequence 2:NP_001094272.1 Gene:Aplp1 RGDID:69257 Length:644 Species:Rattus norvegicus

Alignment Length:60 Identity:19/61 (31%)
Similarity:24/61 (39%) Gaps:15/61 (25%)


  Fly     3 LLILLFVFIALASNSLALKNEICGLPAAAN--------GNC--LALF-----SRWSYDAQ 47
            |.:||.:.:.|....||:.|...|.|:||.        |.|  |.|.     .||..|.|
  Rat    20 LPLLLPLSLLLLRAQLAVGNLAGGSPSAAEAPGSAQVAGLCGRLTLHRDLRTGRWEPDPQ 79

Known Domains:


GeneSequenceDomainRegion External IDIdentity
Acp24A4NP_001036330.1 Kunitz_BPTI 24..77 CDD:278443 12/40 (30%)
Aplp1NP_001094272.1 A4_EXTRA 46..211 CDD:128326 10/35 (29%)
APP_N 55..154 CDD:280358 8/26 (31%)
APP_Cu_bd 156..211 CDD:289676
APP_E2 289..471 CDD:289677
APP_amyloid <602..641 CDD:287486
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
eggNOG 1 0.900 E1_KOG4295
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.900

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