DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment p24-2 and tmed9

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001028280.2 Gene:tmed9 / 613145 ZFINID:ZDB-GENE-050417-434 Length:223 Species:Danio rerio


Alignment Length:214 Identity:129/214 - (60%)
Similarity:167/214 - (78%) Gaps:7/214 - (3%)


- Green bases have known domain annotations that are detailed below.


  Fly     1 MRDQFISLALILCVLHSA--CGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSS 63
            :|.||....|:|..::::  ..|||||.:||:||||||:||||.:|.||:.:|||.:...::|::
Zfish     4 IRMQFTLYFLVLLNIYNSLVSALYFHIGETEKKCFIEEIPDETMIIGNYRTQLYDKQKEEYLPAT 68

  Fly    64 PGIGMHVEVRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNST--AWFSGAQLRVHLDIQV 126
            .|:||.|||:|.|:|::|||.|.|:||..|||||||||.||:.|||:  |.|:|..|||||||||
Zfish    69 QGLGMFVEVKDPDEKVILSRQYGSEGRFIFTSHTPGEHQICLHSNSSKFALFAGGMLRVHLDIQV 133

  Fly   127 GEHAIDYAHVAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQ 191
            |||..:||.:|.|:||||||||:|||::||:||.||||||||||||||.||||||.||||||:.|
Zfish   134 GEHTNNYAEIAAKDKLTELQLRVRQLMEQVDQIQKEQNYQRYREERFRQTSESTNQRVLWWSIVQ 198

  Fly   192 TVVLVCMGFW---HLFNLF 207
            |::||.:|||   ||.:.|
Zfish   199 TLILVAIGFWQMRHLKSFF 217

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 123/190 (65%)
tmed9NP_001028280.2 None

Return to query results.
Submit another query.