DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and tmed10l

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_001007925.1 Gene:tmed10l / 493305 XenbaseID:XB-GENE-5756691 Length:206 Species:Xenopus tropicalis


Alignment Length:203 Identity:62/203 - (30%)
Similarity:102/203 - (50%) Gaps:13/203 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     8 LALILCVLHSACG-LYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVE 71
            |.|:.|.|....| :.|::....:||..||:..:..|...|:|.           ..||:...::
 Frog     6 LLLVPCFLLPGTGAISFYLRPLGKKCLKEEIHKDVLVTGEYEVS-----------EQPGLTCDLK 59

  Fly    72 VRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTA-WFSGAQLRVHLDIQVGEHAIDYAH 135
            |.||...|:.|:..:.:|:.:||:.....:.:|..|.|.: ..|.....:.|||:.|..|.:|..
 Frog    60 VTDSIGHILYSKEDARKGKFAFTTDDNDVYEVCFVSKSPSDTLSFTDQLIALDIKHGVEAKNYKD 124

  Fly   136 VAQKEKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVLVCMGF 200
            ||:.|||..|::.:|:|.|..:.:.|:.:|.:.|||..|.|:|||:.|||::|......||.:..
 Frog   125 VAETEKLKPLEVELRRLEDLTQSVVKDFSYMKKREEEMRDTNESTSLRVLYFSAFSMFCLVALAT 189

  Fly   201 WHLFNLFH 208
            |.:|.|.|
 Frog   190 WQVFYLRH 197

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 56/187 (30%)
tmed10lNP_001007925.1 EMP24_GP25L 19..200 CDD:426051 57/190 (30%)

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