DRSC/TRiP Functional Genomics Resources

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Protein Alignment p24-2 and CG9308

DIOPT Version :10

Sequence 1:NP_788617.1 Gene:p24-2 / 318890 FlyBaseID:FBgn0053105 Length:244 Species:Drosophila melanogaster
Sequence 2:NP_611629.1 Gene:CG9308 / 37507 FlyBaseID:FBgn0034681 Length:203 Species:Drosophila melanogaster


Alignment Length:208 Identity:48/208 - (23%)
Similarity:85/208 - (40%) Gaps:22/208 - (10%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 SLALILCVLHSACGLYFHISQTERKCFIEEVPDETTVIVNYKVELYDPRSNGFMPSSPGIGMHVE 71
            ::.|:|.:..:|||....:...|..||.:.......|.|:::|     ...||    ..:|  ||
  Fly     4 AIVLVLVLFQAACGFIVTLDAHETMCFYDHANVSDKVTVSFEV-----MEGGF----KDVG--VE 57

  Fly    72 VRDSDDKIVLSRVYSSQGRISFTSHTPGEHVICMFSNSTAWFSGAQLRVHLDIQVGEHAIDYAHV 136
            :...||..:......:.|..:||:...|.:.:| |.|..:..:...|.....:   ..||::...
  Fly    58 IAGPDDDRLHHSKQDTMGSFTFTAMKEGRYQLC-FDNKMSTMTPKILMFQFHV---ARAIEFYMD 118

  Fly   137 AQK------EKLTELQLRIRQLLDQVEQITKEQNYQRYREERFRHTSESTNSRVLWWSLAQTVVL 195
            :.|      |:.| :|..|.||..::..:..||.|..:|.......|:....|||.||:...::|
  Fly   119 SSKRVDDVIEQAT-VQSMINQLSAKLGAVKMEQEYMHFRYRGHLEVSDMVELRVLAWSIFGPMML 182

  Fly   196 VCMGFWHLFNLFH 208
            :......::.|.|
  Fly   183 IITAVLEVYYLKH 195

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
p24-2NP_788617.1 EMP24_GP25L 20..206 CDD:426051 42/191 (22%)
CG9308NP_611629.1 EMP24_GP25L 17..198 CDD:426051 44/195 (23%)

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